fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031108 not found in 377aa AT4G17950.1 not_1st 0.420783645 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17950.1     MDSREIHHQQQQQQQQQQQQQQQQQHLQQQQQPPPGMLMSHHNSYNRNPNAAAAVLMGHN
pt031108_POPTR_ MDSREPPPPQPPPQQ-----------LQPPHAPPP-------------PQSQSNMIPG--
                *****    *   **           **  : ***             *:: : :: *  

AT4G17950.1     TSTSQAMHQRLPFGGSMSPH-------QPQQHQYHHPQPQQQIDQKTLESL---GFDGSP
pt031108_POPTR_ ---------PISYPATASPHLINNRSISPQNAAIGGGFPFNQMSAQRLQSKPEGAFDGS-
                          :.: .: ***       .**:       * :*:. : *:*    .**** 

AT4G17950.1     SSVAATQQHSMRFGIDHQQVKKKRGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNS
pt031108_POPTR_ ---SPTSSSGMRFSI--EPAKKKRGRPRKYTPDG--------NIALGLSPT-PIHSGM-S
                   :.*.. .***.*  : .**********:.**        ******:** *: *.  *

AT4G17950.1     YGGGNEGGGGGDSAGANANSSDPPAKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKT
pt031108_POPTR_ AGQADSSGGAGSGVMPDV-ASEHPSKKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKA
                 * .:..**.*... .:. :*: *:*::**************************** **:

AT4G17950.1     GEDIATKILAFTNQGPRAICILSATGAVTNVMLRQANNSNPTGTVKYEGRFEIISLSGSF
pt031108_POPTR_ GEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSG--GSVTYEGRFEIISLSGSF
                *****:**:**::****::*****.**: ** ***.  *.  *:*.**************

AT4G17950.1     LNSESNGTVTKTGNLSVSLAGHEGRIVGGCVDGMLVAGSQVQVIVGSFVPDGRKQKQSAG
pt031108_POPTR_ LLSESNGSRSRTGGLSVSLAGSDGRVLGGGVAGMLTAASAVQVILGSFIADGKKSNSKSL
                * *****: ::**.******* :**::** * ***.*.* ****:***:.**:*.:..: 

AT4G17950.1     RAQNTPEPASAPANMLSFGGVGGPGSPRSQGQQHSSESSEENESNSPLHRRSNNNNSNNH
pt031108_POPTR_ KSGPSSTP---PPQMLNFGAPLTTASPPSRGG--SSESSDEN-GGSPVNRTP--------
                ::  :. *   *.:**.**.   ..** *:*   *****:** ..**::* .        

AT4G17950.1     GIFGNSTPQPLHQIPMQMYQNLWPGNSPQ
pt031108_POPTR_ GIYGNPS-QPIHN--MQMYQ-LWGGQNPE
                **:**.: **:*:  ***** ** *:.*:
BoxShade v3.31 C (beta, 970507) Output
AT4G17950.1     M D S R E I H H Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q H L Q Q Q Q Q P P P G M L M S H H N S Y N R N P N A A A A V L M G H N
pt031108_POPTR_    M D S R E P P P P Q P P P Q Q - - - - - - - - - - - L Q P P H A P P P - - - - - - - - - - - - - P Q S Q S N M I P G - -
 
AT4G17950.1     T S T S Q A M H Q R L P F G G S M S P H - - - - - - - Q P Q Q H Q Y H H P Q P Q Q Q I D Q K T L E S L - - - G F D G S P
pt031108_POPTR_    - - - - - - - - - P I S Y P A T A S P H L I N N R S I S P Q N A A I G G G F P F N Q M S A Q R L Q S K P E G A F D G S -
 
AT4G17950.1     S S V A A T Q Q H S M R F G I D H Q Q V K K K R G R P R K Y A A D G G G G G G G G S N I A L G L A P T S P L P S A S N S
pt031108_POPTR_    - - - S P T S S S G M R F S I - - E P A K K K R G R P R K Y T P D G - - - - - - - - N I A L G L S P T - P I H S G M - S
 
AT4G17950.1     Y G G G N E G G G G G D S A G A N A N S S D P P A K R N R G R P P G S G K K Q L D A L G G T G G V G F T P H V I E V K T
pt031108_POPTR_    A G Q A D S S G G A G S G V M P D V - A S E H P S K K H R G R P P G S G K K Q L D A L G G T G G V G F T P H V I T V K A
 
AT4G17950.1     G E D I A T K I L A F T N Q G P R A I C I L S A T G A V T N V M L R Q A N N S N P T G T V K Y E G R F E I I S L S G S F
pt031108_POPTR_    G E D I A S K I M A F S Q Q G P R T V C I L S A N G A I C N V T L R Q P A M S G - - G S V T Y E G R F E I I S L S G S F
 
AT4G17950.1     L N S E S N G T V T K T G N L S V S L A G H E G R I V G G C V D G M L V A G S Q V Q V I V G S F V P D G R K Q K Q S A G
pt031108_POPTR_    L L S E S N G S R S R T G G L S V S L A G S D G R V L G G G V A G M L T A A S A V Q V I L G S F I A D G K K S N S K S L
 
AT4G17950.1     R A Q N T P E P A S A P A N M L S F G G V G G P G S P R S Q G Q Q H S S E S S E E N E S N S P L H R R S N N N N S N N H
pt031108_POPTR_    K S G P S S T P - - - P P Q M L N F G A P L T T A S P P S R G G - - S S E S S D E N - G G S P V N R T P - - - - - - - -
 
AT4G17950.1     G I F G N S T P Q P L H Q I P M Q M Y Q N L W P G N S P Q
pt031108_POPTR_    G I Y G N P S - Q P I H N - - M Q M Y Q - L W G G Q N P E
 
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