fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012069 not found in 362aa AT4G17950.1 1st_1st 0.359454855 Ib
Pt010953 not found in 375aa AT4G17950.1 1st_1st 0.427597955 Ia
Pt031108 not found in 377aa AT4G17950.1 not_1st 0.420783645 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17950.1     MDSREIHHQQQQQQQQQQQQQQQQQHLQQQQQPPPG------MLMSHHNSY---NRNPNA
pt010953_POPTR_ MDSREPPQPSPQPQQ-----------LQSPHAPPPQLQSQPSMILVPTSSY------PST
gm012069_Glyma0 MDAREPLRP-----------------------PPPT------IMAGPT-SYGSANIGPNS
pt031108_POPTR_ MDSREPPPPQPPPQQ-----------LQPPHAPPPP-QSQSNMIPGPI-SY------PAT
                **:**                           ***       ::     **      * :

AT4G17950.1     AAAVLMGHNTSTSQ--AMHQRLPFGGSMSPHQPQQHQYHHPQPQQQIDQKTLESLGFDGS
pt010953_POPTR_ TS-HLINNPNISPQNAALGGGFPFNTMSGNRL-------QSKPEG----------AFDG-
gm012069_Glyma0 SA-------TVSAMLAPATAQFPFAAVPQQHQPPPS--SEPFPAS----------AYDGS
pt031108_POPTR_ ASPHLINNRSISPQNAAIGGGFPFNQMSAQRL-------QSKPEG----------AFDG-
                ::       . :.   .    :**      :        .. *            .:** 

AT4G17950.1     PSSVAATQQHSMRFGIDHQQVKKKRGRPRKYAADGGGGGGGGSNIALGLAPT---SPLPS
pt010953_POPTR_ SSPTSSS---GMRFSI--EPAKKKRGRPRKYTPDG--------NIALGLSPT----PVPS
gm012069_Glyma0 SSPMKAC---SL--------AKKKRGRPRKYSPDG--------NIALRLAPTHASPPAAA
pt031108_POPTR_ SSPTSSS---GMRFSI--EPAKKKRGRPRKYTPDG--------NIALGLSPT----PIHS
                .*.  :    .:        .**********:.**        **** *:**    *  :

AT4G17950.1     ASNSYGGGNEGGGGGDSAGANA------NSSDPPAKRNRGRPPGSGKKQLDALGGTGGVG
pt010953_POPTR_ GI--------SAGHADSGGG---GVTHDAASEHPSKKNRGRPPGSGKKQLDALGGVGGVG
gm012069_Glyma0 SG--------GGGGGDSAGM--------ASADAPAKKHRGRPPGSGKKQLDALGA-GGVG
pt031108_POPTR_ GM--------SAGQADSSGGAGSGVMPDVASEHPSKKHRGRPPGSGKKQLDALGGTGGVG
                .         ..* .**.*          ::: *:*::****************. ****

AT4G17950.1     FTPHVIEVKTGEDIATKILAFTNQGPRAICILSATGAVTNVMLRQANNSNPTGTVKYEGR
pt010953_POPTR_ FTPHVITVKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSG--GSVTYEGR
gm012069_Glyma0 FTPHVILVESGEDITAKIMAFSQQGPRTVCILSAIGAIGNVTLQQSAMTG--GIATYEGR
pt031108_POPTR_ FTPHVITVKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSG--GSVTYEGR
                ****** *::****::**:**::****::***** **: ** *:*.  :.  * ..****

AT4G17950.1     FEIISLSGSFLNSESNGTVTKTGNLSVSLAGHEGRIVGGCVDGMLVAGSQVQVIVGSFVP
pt010953_POPTR_ FEIISLSGSFLLSESNGSRSRSGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIA
gm012069_Glyma0 FEIISLSGSLQQSENNSERSRTCTLNVTLAGSDGRVLGGGVAGTLIAASTVQVIVGSFIA
pt031108_POPTR_ FEIISLSGSFLLSESNGSRSRTGGLSVSLAGSDGRVLGGGVAGMLTAASAVQVILGSFIA
                *********:  **.*.  :::  *.*:*** :**::** * * * *.* ****:***:.

AT4G17950.1     DGRKQKQSAGRAQNTPEPASAPANMLSFGGVGGPGSPRSQGQQHSSESSEENESNSPLHR
pt010953_POPTR_ DGKKSNSSASKSGPSSTP---PPQMLNFSAPLTTASPPSQGG--SSDSSDEN-GGSPVNR
gm012069_Glyma0 DAKKSSSNALKSGSSSAP---PPQMLTFGSSMTPNSPTSQGP--STESSEEQ-DHSPFCR
pt031108_POPTR_ DGKKSNSKSLKSGPSSTP---PPQMLNFGAPLTTASPPSRGG--SSESSDEN-GGSPVNR
                *.:*....: ::  :. *   *.:**.*..   . ** *:*   *::**:*: . **. *

AT4G17950.1     RSNNNNSNNHGIFGNSTPQPLHQIPMQMYQN-LWPGNSPQ
pt010953_POPTR_ NP--------GIYGNPN-QSIHN--MQMYQ--LWADQNPR
gm012069_Glyma0 GPG--PGSGHGLYNNAS-QPVHN--MPMYHHPLWAGQSHQ
pt031108_POPTR_ TP--------GIYGNPS-QPIHN--MQMYQ--LWGGQNPE
                 .        *::.*.. *.:*:  * **:  ** .:. .
BoxShade v3.31 C (beta, 970507) Output
AT4G17950.1     M D S R E I H H Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q H L Q Q Q Q Q P P P G - - - - - - M L M S H H N S Y - - - N R N P N A
pt010953_POPTR_    M D S R E P P Q P S P Q P Q Q - - - - - - - - - - - L Q S P H A P P P Q L Q S Q P S M I L V P T S S Y - - - - - - P S T
gm012069_Glyma0    M D A R E P L R P - - - - - - - - - - - - - - - - - - - - - - - P P P T - - - - - - I M A G P T - S Y G S A N I G P N S
pt031108_POPTR_    M D S R E P P P P Q P P P Q Q - - - - - - - - - - - L Q P P H A P P P P - Q S Q S N M I P G P I - S Y - - - - - - P A T
 
AT4G17950.1     A A A V L M G H N T S T S Q - - A M H Q R L P F G G S M S P H Q P Q Q H Q Y H H P Q P Q Q Q I D Q K T L E S L G F D G S
pt010953_POPTR_    T S - H L I N N P N I S P Q N A A L G G G F P F N T M S G N R L - - - - - - - Q S K P E G - - - - - - - - - - A F D G -
gm012069_Glyma0    S A - - - - - - - T V S A M L A P A T A Q F P F A A V P Q Q H Q P P P S - - S E P F P A S - - - - - - - - - - A Y D G S
pt031108_POPTR_    A S P H L I N N R S I S P Q N A A I G G G F P F N Q M S A Q R L - - - - - - - Q S K P E G - - - - - - - - - - A F D G -
 
AT4G17950.1     P S S V A A T Q Q H S M R F G I D H Q Q V K K K R G R P R K Y A A D G G G G G G G G S N I A L G L A P T - - - S P L P S
pt010953_POPTR_    S S P T S S S - - - G M R F S I - - E P A K K K R G R P R K Y T P D G - - - - - - - - N I A L G L S P T - - - - P V P S
gm012069_Glyma0    S S P M K A C - - - S L - - - - - - - - A K K K R G R P R K Y S P D G - - - - - - - - N I A L R L A P T H A S P P A A A
pt031108_POPTR_    S S P T S S S - - - G M R F S I - - E P A K K K R G R P R K Y T P D G - - - - - - - - N I A L G L S P T - - - - P I H S
 
AT4G17950.1     A S N S Y G G G N E G G G G G D S A G A N A - - - - - - N S S D P P A K R N R G R P P G S G K K Q L D A L G G T G G V G
pt010953_POPTR_    G I - - - - - - - - S A G H A D S G G G - - - G V T H D A A S E H P S K K N R G R P P G S G K K Q L D A L G G V G G V G
gm012069_Glyma0    S G - - - - - - - - G G G G G D S A G M - - - - - - - - A S A D A P A K K H R G R P P G S G K K Q L D A L G A - G G V G
pt031108_POPTR_    G M - - - - - - - - S A G Q A D S S G G A G S G V M P D V A S E H P S K K H R G R P P G S G K K Q L D A L G G T G G V G
 
AT4G17950.1     F T P H V I E V K T G E D I A T K I L A F T N Q G P R A I C I L S A T G A V T N V M L R Q A N N S N P T G T V K Y E G R
pt010953_POPTR_    F T P H V I T V K A G E D I A S K I M A F S Q Q G P R T V C I L S A N G A I C N V T L R Q P A M S G - - G S V T Y E G R
gm012069_Glyma0    F T P H V I L V E S G E D I T A K I M A F S Q Q G P R T V C I L S A I G A I G N V T L Q Q S A M T G - - G I A T Y E G R
pt031108_POPTR_    F T P H V I T V K A G E D I A S K I M A F S Q Q G P R T V C I L S A N G A I C N V T L R Q P A M S G - - G S V T Y E G R
 
AT4G17950.1     F E I I S L S G S F L N S E S N G T V T K T G N L S V S L A G H E G R I V G G C V D G M L V A G S Q V Q V I V G S F V P
pt010953_POPTR_    F E I I S L S G S F L L S E S N G S R S R S G G L S V S L A G S D G R V L G G G V A G M L T A A S P V Q V I V G S F I A
gm012069_Glyma0    F E I I S L S G S L Q Q S E N N S E R S R T C T L N V T L A G S D G R V L G G G V A G T L I A A S T V Q V I V G S F I A
pt031108_POPTR_    F E I I S L S G S F L L S E S N G S R S R T G G L S V S L A G S D G R V L G G G V A G M L T A A S A V Q V I L G S F I A
 
AT4G17950.1     D G R K Q K Q S A G R A Q N T P E P A S A P A N M L S F G G V G G P G S P R S Q G Q Q H S S E S S E E N E S N S P L H R
pt010953_POPTR_    D G K K S N S S A S K S G P S S T P - - - P P Q M L N F S A P L T T A S P P S Q G G - - S S D S S D E N - G G S P V N R
gm012069_Glyma0    D A K K S S S N A L K S G S S S A P - - - P P Q M L T F G S S M T P N S P T S Q G P - - S T E S S E E Q - D H S P F C R
pt031108_POPTR_    D G K K S N S K S L K S G P S S T P - - - P P Q M L N F G A P L T T A S P P S R G G - - S S E S S D E N - G G S P V N R
 
AT4G17950.1     R S N N N N S N N H G I F G N S T P Q P L H Q I P M Q M Y Q N - L W P G N S P Q
pt010953_POPTR_    N P - - - - - - - - G I Y G N P N - Q S I H N - - M Q M Y Q - - L W A D Q N P R
gm012069_Glyma0    G P G - - P G S G H G L Y N N A S - Q P V H N - - M P M Y H H P L W A G Q S H Q
pt031108_POPTR_    T P - - - - - - - - G I Y G N P S - Q P I H N - - M Q M Y Q - - L W G G Q N P E
 
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