Input
| Putative repression domain
|
|
AT4G17950.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt031108 |
not found in 377aa |
AT4G17950.1 |
not_1st |
0.420783645 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G17950.1 MDSREIHHQQQQQQQQQQQQQQQQQHLQQQQQPPPGMLMSHHNSYNRNPNAAAAVLMGHN
pt031108_POPTR_ MDSREPPPPQPPPQQ-----------LQPPHAPPP-------------PQSQSNMIPG--
***** * ** ** : *** *:: : :: *
AT4G17950.1 TSTSQAMHQRLPFGGSMSPH-------QPQQHQYHHPQPQQQIDQKTLESL---GFDGSP
pt031108_POPTR_ ---------PISYPATASPHLINNRSISPQNAAIGGGFPFNQMSAQRLQSKPEGAFDGS-
:.: .: *** .**: * :*:. : *:* .****
AT4G17950.1 SSVAATQQHSMRFGIDHQQVKKKRGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNS
pt031108_POPTR_ ---SPTSSSGMRFSI--EPAKKKRGRPRKYTPDG--------NIALGLSPT-PIHSGM-S
:.*.. .***.* : .**********:.** ******:** *: *. *
AT4G17950.1 YGGGNEGGGGGDSAGANANSSDPPAKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKT
pt031108_POPTR_ AGQADSSGGAGSGVMPDV-ASEHPSKKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKA
* .:..**.*... .:. :*: *:*::**************************** **:
AT4G17950.1 GEDIATKILAFTNQGPRAICILSATGAVTNVMLRQANNSNPTGTVKYEGRFEIISLSGSF
pt031108_POPTR_ GEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSG--GSVTYEGRFEIISLSGSF
*****:**:**::****::*****.**: ** ***. *. *:*.**************
AT4G17950.1 LNSESNGTVTKTGNLSVSLAGHEGRIVGGCVDGMLVAGSQVQVIVGSFVPDGRKQKQSAG
pt031108_POPTR_ LLSESNGSRSRTGGLSVSLAGSDGRVLGGGVAGMLTAASAVQVILGSFIADGKKSNSKSL
* *****: ::**.******* :**::** * ***.*.* ****:***:.**:*.:..:
AT4G17950.1 RAQNTPEPASAPANMLSFGGVGGPGSPRSQGQQHSSESSEENESNSPLHRRSNNNNSNNH
pt031108_POPTR_ KSGPSSTP---PPQMLNFGAPLTTASPPSRGG--SSESSDEN-GGSPVNRTP--------
:: :. * *.:**.**. ..** *:* *****:** ..**::* .
AT4G17950.1 GIFGNSTPQPLHQIPMQMYQNLWPGNSPQ
pt031108_POPTR_ GIYGNPS-QPIHN--MQMYQ-LWGGQNPE
**:**.: **:*: ***** ** *:.*:
BoxShade v3.31 C (beta, 970507) Output
AT4G17950.1 |
M |
D |
S |
R |
E |
I |
H |
H |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
Q |
H |
L |
Q |
Q |
Q |
Q |
Q |
P |
P |
P |
G |
M |
L |
M |
S |
H |
H |
N |
S |
Y |
N |
R |
N |
P |
N |
A |
A |
A |
A |
V |
L |
M |
G |
H |
N |
pt031108_POPTR_ |
M |
D |
S |
R |
E |
P |
P |
P |
P |
Q |
P |
P |
P |
Q |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
L |
Q |
P |
P |
H |
A |
P |
P |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
Q |
S |
Q |
S |
N |
M |
I |
P |
G |
- |
- |
|
AT4G17950.1 |
T |
S |
T |
S |
Q |
A |
M |
H |
Q |
R |
L |
P |
F |
G |
G |
S |
M |
S |
P |
H |
- |
- |
- |
- |
- |
- |
- |
Q |
P |
Q |
Q |
H |
Q |
Y |
H |
H |
P |
Q |
P |
Q |
Q |
Q |
I |
D |
Q |
K |
T |
L |
E |
S |
L |
- |
- |
- |
G |
F |
D |
G |
S |
P |
pt031108_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
I |
S |
Y |
P |
A |
T |
A |
S |
P |
H |
L |
I |
N |
N |
R |
S |
I |
S |
P |
Q |
N |
A |
A |
I |
G |
G |
G |
F |
P |
F |
N |
Q |
M |
S |
A |
Q |
R |
L |
Q |
S |
K |
P |
E |
G |
A |
F |
D |
G |
S |
- |
|
AT4G17950.1 |
S |
S |
V |
A |
A |
T |
Q |
Q |
H |
S |
M |
R |
F |
G |
I |
D |
H |
Q |
Q |
V |
K |
K |
K |
R |
G |
R |
P |
R |
K |
Y |
A |
A |
D |
G |
G |
G |
G |
G |
G |
G |
G |
S |
N |
I |
A |
L |
G |
L |
A |
P |
T |
S |
P |
L |
P |
S |
A |
S |
N |
S |
pt031108_POPTR_ |
- |
- |
- |
S |
P |
T |
S |
S |
S |
G |
M |
R |
F |
S |
I |
- |
- |
E |
P |
A |
K |
K |
K |
R |
G |
R |
P |
R |
K |
Y |
T |
P |
D |
G |
- |
- |
- |
- |
- |
- |
- |
- |
N |
I |
A |
L |
G |
L |
S |
P |
T |
- |
P |
I |
H |
S |
G |
M |
- |
S |
|
AT4G17950.1 |
Y |
G |
G |
G |
N |
E |
G |
G |
G |
G |
G |
D |
S |
A |
G |
A |
N |
A |
N |
S |
S |
D |
P |
P |
A |
K |
R |
N |
R |
G |
R |
P |
P |
G |
S |
G |
K |
K |
Q |
L |
D |
A |
L |
G |
G |
T |
G |
G |
V |
G |
F |
T |
P |
H |
V |
I |
E |
V |
K |
T |
pt031108_POPTR_ |
A |
G |
Q |
A |
D |
S |
S |
G |
G |
A |
G |
S |
G |
V |
M |
P |
D |
V |
- |
A |
S |
E |
H |
P |
S |
K |
K |
H |
R |
G |
R |
P |
P |
G |
S |
G |
K |
K |
Q |
L |
D |
A |
L |
G |
G |
T |
G |
G |
V |
G |
F |
T |
P |
H |
V |
I |
T |
V |
K |
A |
|
AT4G17950.1 |
G |
E |
D |
I |
A |
T |
K |
I |
L |
A |
F |
T |
N |
Q |
G |
P |
R |
A |
I |
C |
I |
L |
S |
A |
T |
G |
A |
V |
T |
N |
V |
M |
L |
R |
Q |
A |
N |
N |
S |
N |
P |
T |
G |
T |
V |
K |
Y |
E |
G |
R |
F |
E |
I |
I |
S |
L |
S |
G |
S |
F |
pt031108_POPTR_ |
G |
E |
D |
I |
A |
S |
K |
I |
M |
A |
F |
S |
Q |
Q |
G |
P |
R |
T |
V |
C |
I |
L |
S |
A |
N |
G |
A |
I |
C |
N |
V |
T |
L |
R |
Q |
P |
A |
M |
S |
G |
- |
- |
G |
S |
V |
T |
Y |
E |
G |
R |
F |
E |
I |
I |
S |
L |
S |
G |
S |
F |
|
AT4G17950.1 |
L |
N |
S |
E |
S |
N |
G |
T |
V |
T |
K |
T |
G |
N |
L |
S |
V |
S |
L |
A |
G |
H |
E |
G |
R |
I |
V |
G |
G |
C |
V |
D |
G |
M |
L |
V |
A |
G |
S |
Q |
V |
Q |
V |
I |
V |
G |
S |
F |
V |
P |
D |
G |
R |
K |
Q |
K |
Q |
S |
A |
G |
pt031108_POPTR_ |
L |
L |
S |
E |
S |
N |
G |
S |
R |
S |
R |
T |
G |
G |
L |
S |
V |
S |
L |
A |
G |
S |
D |
G |
R |
V |
L |
G |
G |
G |
V |
A |
G |
M |
L |
T |
A |
A |
S |
A |
V |
Q |
V |
I |
L |
G |
S |
F |
I |
A |
D |
G |
K |
K |
S |
N |
S |
K |
S |
L |
|
AT4G17950.1 |
R |
A |
Q |
N |
T |
P |
E |
P |
A |
S |
A |
P |
A |
N |
M |
L |
S |
F |
G |
G |
V |
G |
G |
P |
G |
S |
P |
R |
S |
Q |
G |
Q |
Q |
H |
S |
S |
E |
S |
S |
E |
E |
N |
E |
S |
N |
S |
P |
L |
H |
R |
R |
S |
N |
N |
N |
N |
S |
N |
N |
H |
pt031108_POPTR_ |
K |
S |
G |
P |
S |
S |
T |
P |
- |
- |
- |
P |
P |
Q |
M |
L |
N |
F |
G |
A |
P |
L |
T |
T |
A |
S |
P |
P |
S |
R |
G |
G |
- |
- |
S |
S |
E |
S |
S |
D |
E |
N |
- |
G |
G |
S |
P |
V |
N |
R |
T |
P |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT4G17950.1 |
G |
I |
F |
G |
N |
S |
T |
P |
Q |
P |
L |
H |
Q |
I |
P |
M |
Q |
M |
Y |
Q |
N |
L |
W |
P |
G |
N |
S |
P |
Q |
pt031108_POPTR_ |
G |
I |
Y |
G |
N |
P |
S |
- |
Q |
P |
I |
H |
N |
- |
- |
M |
Q |
M |
Y |
Q |
- |
L |
W |
G |
G |
Q |
N |
P |
E |
|
|