fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010953 not found in 375aa AT4G17950.1 1st_1st 0.427597955 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17950.1     MDSREIHHQQQQQQQQQQQQQQQQQHLQQQQ-QPPPGMLMSHHNSYNRNPNAAAAVLMGH
pt010953_POPTR_ MDSRE------PPQPSPQPQQLQSPHAPPPQLQSQPSMILVPTSSY---PSTTSHLINNP
                *****        * . * ** *. *    * *. *.*::   .**   *.::: :: . 

AT4G17950.1     NTS-TSQAMHQRLPFGGSMSPHQPQQHQYHHPQPQQQIDQKTLESLGFDGSPSSVAATQQ
pt010953_POPTR_ NISPQNAALGGGFPF-NTMSGNRLQS------KPEG----------AFDGS----SPTSS
                * *  . *:   :** .:** :: *.      :*:           .****    :.*..

AT4G17950.1     HSMRFGIDHQQVKKKRGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNSYGGGNEGG
pt010953_POPTR_ SGMRFSI--EPAKKKRGRPRKYTPDG--------NIALGLSPT-PVPSGISA--GHADSG
                 .***.*  : .**********:.**        ******:** *:**. .:  *  :.*

AT4G17950.1     GGGDSAGANANSSDPPAKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKTGEDIATKI
pt010953_POPTR_ GGGVTHDA---ASEHPSKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKI
                *** : .*   :*: *:*:******************.********** **:*****:**

AT4G17950.1     LAFTNQGPRAICILSATGAVTNVMLRQANNSNPTGTVKYEGRFEIISLSGSFLNSESNGT
pt010953_POPTR_ MAFSQQGPRTVCILSANGAICNVTLRQPAMSG--GSVTYEGRFEIISLSGSFLLSESNGS
                :**::****::*****.**: ** ***.  *.  *:*.*************** *****:

AT4G17950.1     VTKTGNLSVSLAGHEGRIVGGCVDGMLVAGSQVQVIVGSFVPDGRKQKQSAGRAQNTPEP
pt010953_POPTR_ RSRSGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIADGKKSNSSASKSGPSSTP
                 :::*.******* :**::** * ***.*.* ********:.**:*.:.**.::  :. *

AT4G17950.1     ASAPANMLSFGGVGGPGSPRSQGQQHSSESSEENESNSPLHRRSNNNNSNNHGIFGNSTP
pt010953_POPTR_ ---PPQMLNFSAPLTTASPPSQGG--SSDSSDEN-GGSPVNR--------NPGIYGNPN-
                   *.:**.*..   ..** ***   **:**:** ..**::*        * **:**.. 

AT4G17950.1     QPLHQIPMQMYQNLWPGNSPQ
pt010953_POPTR_ QSIHN--MQMYQ-LWADQNPR
                *.:*:  ***** **..:.*:
BoxShade v3.31 C (beta, 970507) Output
AT4G17950.1     M D S R E I H H Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q H L Q Q Q Q - Q P P P G M L M S H H N S Y N R N P N A A A A V L M G H
pt010953_POPTR_    M D S R E - - - - - - P P Q P S P Q P Q Q L Q S P H A P P P Q L Q S Q P S M I L V P T S S Y - - - P S T T S H L I N N P
 
AT4G17950.1     N T S - T S Q A M H Q R L P F G G S M S P H Q P Q Q H Q Y H H P Q P Q Q Q I D Q K T L E S L G F D G S P S S V A A T Q Q
pt010953_POPTR_    N I S P Q N A A L G G G F P F - N T M S G N R L Q S - - - - - - K P E G - - - - - - - - - - A F D G S - - - - S P T S S
 
AT4G17950.1     H S M R F G I D H Q Q V K K K R G R P R K Y A A D G G G G G G G G S N I A L G L A P T S P L P S A S N S Y G G G N E G G
pt010953_POPTR_    S G M R F S I - - E P A K K K R G R P R K Y T P D G - - - - - - - - N I A L G L S P T - P V P S G I S A - - G H A D S G
 
AT4G17950.1     G G G D S A G A N A N S S D P P A K R N R G R P P G S G K K Q L D A L G G T G G V G F T P H V I E V K T G E D I A T K I
pt010953_POPTR_    G G G V T H D A - - - A S E H P S K K N R G R P P G S G K K Q L D A L G G V G G V G F T P H V I T V K A G E D I A S K I
 
AT4G17950.1     L A F T N Q G P R A I C I L S A T G A V T N V M L R Q A N N S N P T G T V K Y E G R F E I I S L S G S F L N S E S N G T
pt010953_POPTR_    M A F S Q Q G P R T V C I L S A N G A I C N V T L R Q P A M S G - - G S V T Y E G R F E I I S L S G S F L L S E S N G S
 
AT4G17950.1     V T K T G N L S V S L A G H E G R I V G G C V D G M L V A G S Q V Q V I V G S F V P D G R K Q K Q S A G R A Q N T P E P
pt010953_POPTR_    R S R S G G L S V S L A G S D G R V L G G G V A G M L T A A S P V Q V I V G S F I A D G K K S N S S A S K S G P S S T P
 
AT4G17950.1     A S A P A N M L S F G G V G G P G S P R S Q G Q Q H S S E S S E E N E S N S P L H R R S N N N N S N N H G I F G N S T P
pt010953_POPTR_    - - - P P Q M L N F S A P L T T A S P P S Q G G - - S S D S S D E N - G G S P V N R - - - - - - - - N P G I Y G N P N -
 
AT4G17950.1     Q P L H Q I P M Q M Y Q N L W P G N S P Q
pt010953_POPTR_    Q S I H N - - M Q M Y Q - L W A D Q N P R
 
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