fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010953 not found in 375aa AT4G17950.1 1st_1st 0.427597955 Ia
Pt031108 not found in 377aa AT4G17950.1 not_1st 0.420783645 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G17950.1     MDSREIHHQQQQQQQQQQQQQQQQQHLQQQQQPPPG------MLMSHHNSYNRNPNAAAA
pt031108_POPTR_ MDSRE-----------PPPPQPPPQQLQPPHAPPPP-QSQSNMIPGPI-SY---PATASP
pt010953_POPTR_ MDSRE-----------PPQPSPQPQQLQSPHAPPPQLQSQPSMILVPTSSY---PSTTS-
                *****               .   *:**  : ***       *:     **   * ::: 

AT4G17950.1     VLMGHNTSTSQ--AMHQRLPFGGSMSPHQPQQHQYHHPQPQQQIDQKTLESLGFDGSPSS
pt031108_POPTR_ HLINNRSISPQNAAIGGGFPF-NQMSAQRLQS------KPEG----------AFDGS---
pt010953_POPTR_ HLINNPNISPQNAALGGGFPF-NTMSGNRLQS------KPEG----------AFDGS---
                 *:.: . :.*  *:   :** . ** :: *.      :*:           .****   

AT4G17950.1     VAATQQHSMRFGIDHQQVKKKRGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNSYG
pt031108_POPTR_ -SPTSSSGMRFSI--EPAKKKRGRPRKYTPDG--------NIALGLSPT-PIHSGM-SAG
pt010953_POPTR_ -SPTSSSGMRFSI--EPAKKKRGRPRKYTPDG--------NIALGLSPT-PVPSGI-SAG
                 :.*.. .***.*  : .**********:.**        ******:** *: *.  * *

AT4G17950.1     GGNEGGGGGDSAGANAN-SSDPPAKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKTG
pt031108_POPTR_ QADSSGGAG--SGVMPDVASEHPSKKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKAG
pt010953_POPTR_ HADSGGG-----GVTHDAASEHPSKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAG
                 .:..**     *.  : :*: *:*::*****************.********** **:*

AT4G17950.1     EDIATKILAFTNQGPRAICILSATGAVTNVMLRQANNSNPTGTVKYEGRFEIISLSGSFL
pt031108_POPTR_ EDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSG--GSVTYEGRFEIISLSGSFL
pt010953_POPTR_ EDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSG--GSVTYEGRFEIISLSGSFL
                ****:**:**::****::*****.**: ** ***.  *.  *:*.***************

AT4G17950.1     NSESNGTVTKTGNLSVSLAGHEGRIVGGCVDGMLVAGSQVQVIVGSFVPDGRKQKQSAGR
pt031108_POPTR_ LSESNGSRSRTGGLSVSLAGSDGRVLGGGVAGMLTAASAVQVILGSFIADGKKSNSKSLK
pt010953_POPTR_ LSESNGSRSRSGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIADGKKSNSSASK
                 *****: :::*.******* :**::** * ***.*.* ****:***:.**:*.:..: :

AT4G17950.1     AQNTPEPASAPANMLSFGGVGGPGSPRSQGQQHSSESSEENESNSPLHRRSNNNNSNNHG
pt031108_POPTR_ SGPSSTP---PPQMLNFGAPLTTASPPSRGG--SSESSDEN-GGSPVNR--------TPG
pt010953_POPTR_ SGPSSTP---PPQMLNFSAPLTTASPPSQGG--SSDSSDEN-GGSPVNR--------NPG
                :  :. *   *.:**.*..   ..** *:*   **:**:** ..**::*        . *

AT4G17950.1     IFGNSTPQPLHQIPMQMYQNLWPGNSPQ
pt031108_POPTR_ IYGNPS-QPIHN--MQMYQ-LWGGQNPE
pt010953_POPTR_ IYGNPN-QSIHN--MQMYQ-LWADQNPR
                *:**.. *.:*:  ***** ** .:.*.
BoxShade v3.31 C (beta, 970507) Output
AT4G17950.1     M D S R E I H H Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q H L Q Q Q Q Q P P P G - - - - - - M L M S H H N S Y N R N P N A A A A
pt031108_POPTR_    M D S R E - - - - - - - - - - - P P P P Q P P P Q Q L Q P P H A P P P P - Q S Q S N M I P G P I - S Y - - - P A T A S P
pt010953_POPTR_    M D S R E - - - - - - - - - - - P P Q P S P Q P Q Q L Q S P H A P P P Q L Q S Q P S M I L V P T S S Y - - - P S T T S -
 
AT4G17950.1     V L M G H N T S T S Q - - A M H Q R L P F G G S M S P H Q P Q Q H Q Y H H P Q P Q Q Q I D Q K T L E S L G F D G S P S S
pt031108_POPTR_    H L I N N R S I S P Q N A A I G G G F P F - N Q M S A Q R L Q S - - - - - - K P E G - - - - - - - - - - A F D G S - - -
pt010953_POPTR_    H L I N N P N I S P Q N A A L G G G F P F - N T M S G N R L Q S - - - - - - K P E G - - - - - - - - - - A F D G S - - -
 
AT4G17950.1     V A A T Q Q H S M R F G I D H Q Q V K K K R G R P R K Y A A D G G G G G G G G S N I A L G L A P T S P L P S A S N S Y G
pt031108_POPTR_    - S P T S S S G M R F S I - - E P A K K K R G R P R K Y T P D G - - - - - - - - N I A L G L S P T - P I H S G M - S A G
pt010953_POPTR_    - S P T S S S G M R F S I - - E P A K K K R G R P R K Y T P D G - - - - - - - - N I A L G L S P T - P V P S G I - S A G
 
AT4G17950.1     G G N E G G G G G D S A G A N A N - S S D P P A K R N R G R P P G S G K K Q L D A L G G T G G V G F T P H V I E V K T G
pt031108_POPTR_    Q A D S S G G A G - - S G V M P D V A S E H P S K K H R G R P P G S G K K Q L D A L G G T G G V G F T P H V I T V K A G
pt010953_POPTR_    H A D S G G G - - - - - G V T H D A A S E H P S K K N R G R P P G S G K K Q L D A L G G V G G V G F T P H V I T V K A G
 
AT4G17950.1     E D I A T K I L A F T N Q G P R A I C I L S A T G A V T N V M L R Q A N N S N P T G T V K Y E G R F E I I S L S G S F L
pt031108_POPTR_    E D I A S K I M A F S Q Q G P R T V C I L S A N G A I C N V T L R Q P A M S G - - G S V T Y E G R F E I I S L S G S F L
pt010953_POPTR_    E D I A S K I M A F S Q Q G P R T V C I L S A N G A I C N V T L R Q P A M S G - - G S V T Y E G R F E I I S L S G S F L
 
AT4G17950.1     N S E S N G T V T K T G N L S V S L A G H E G R I V G G C V D G M L V A G S Q V Q V I V G S F V P D G R K Q K Q S A G R
pt031108_POPTR_    L S E S N G S R S R T G G L S V S L A G S D G R V L G G G V A G M L T A A S A V Q V I L G S F I A D G K K S N S K S L K
pt010953_POPTR_    L S E S N G S R S R S G G L S V S L A G S D G R V L G G G V A G M L T A A S P V Q V I V G S F I A D G K K S N S S A S K
 
AT4G17950.1     A Q N T P E P A S A P A N M L S F G G V G G P G S P R S Q G Q Q H S S E S S E E N E S N S P L H R R S N N N N S N N H G
pt031108_POPTR_    S G P S S T P - - - P P Q M L N F G A P L T T A S P P S R G G - - S S E S S D E N - G G S P V N R - - - - - - - - T P G
pt010953_POPTR_    S G P S S T P - - - P P Q M L N F S A P L T T A S P P S Q G G - - S S D S S D E N - G G S P V N R - - - - - - - - N P G
 
AT4G17950.1     I F G N S T P Q P L H Q I P M Q M Y Q N L W P G N S P Q
pt031108_POPTR_    I Y G N P S - Q P I H N - - M Q M Y Q - L W G G Q N P E
pt010953_POPTR_    I Y G N P N - Q S I H N - - M Q M Y Q - L W A D Q N P R
 
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