fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012069 not found in 362aa AT4G17950.1 1st_1st 0.359454855 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17950.1     MDSREIHHQQQQQQQQQQQQQQQQQHLQQQQQPPPGMLMSHHNSY---NRNPNAAAAVLM
gm012069_Glyma0 MDARE------------------------PLRPPPPTIMAGPTSYGSANIGPNSSATVSA
                **:**                          :***  :*:  .**   * .**::*:*  

AT4G17950.1     GHNTSTSQAMHQRLPFGGSMSPHQPQQHQYHHPQPQQQIDQKTLESLGFDGSPSSVAATQ
gm012069_Glyma0 MLAPATAQ-----FPFAAV-----PQQHQ---PPPSSE----PFPASAYDGSSSPMKAC-
                   .:*:*     :**..      *****   * *..:    .: : .:***.*.: *  

AT4G17950.1     QHSMRFGIDHQQVKKKRGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNSYGGGNEG
gm012069_Glyma0 ----------SLAKKKRGRPRKYSPDG--------NIALRLAPTHASPPAAAS-----GG
                          . .**********:.**        **** **** . *.*: *      *

AT4G17950.1     GGGGDSAGANANSSDPPAKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKTGEDIATK
gm012069_Glyma0 GGGGDSAG--MASADAPAKKHRGRPPGSGKKQLDALGA-GGVGFTPHVILVESGEDITAK
                ********    *:*.***::****************. ********** *::****::*

AT4G17950.1     ILAFTNQGPRAICILSATGAVTNVMLRQANNSNPTGTVKYEGRFEIISLSGSFLNSESNG
gm012069_Glyma0 IMAFSQQGPRTVCILSAIGAIGNVTLQQSAMTG--GIATYEGRFEIISLSGSLQQSENNS
                *:**::****::***** **: ** *:*:  :.  * ..*************: :**.*.

AT4G17950.1     TVTKTGNLSVSLAGHEGRIVGGCVDGMLVAGSQVQVIVGSFVPDGRKQKQSAGRAQNTPE
gm012069_Glyma0 ERSRTCTLNVTLAGSDGRVLGGGVAGTLIAASTVQVIVGSFIADAKKSSSNALKSGSSSA
                  ::* .*.*:*** :**::** * * *:*.* ********:.*.:*....* :: .:. 

AT4G17950.1     PASAPANMLSFGGVGGPGSPRSQGQQHSSESSEENESNSPLHRRSNNNNSNNHGIFGNST
gm012069_Glyma0 P---PPQMLTFGSSMTPNSPTSQGP--STESSEE-QDHSPFCR--GPGPGSGHGLYNNAS
                *   *.:**:**.   *.** ***   *:***** :.:**: *  . . ...**::.*::

AT4G17950.1     PQPLHQIPMQMYQNLWPGNSPQ
gm012069_Glyma0 -QPVHNMPM-YHHPLWAGQSHQ
                 **:*::**  :: **.*:* *
BoxShade v3.31 C (beta, 970507) Output
AT4G17950.1     M D S R E I H H Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q H L Q Q Q Q Q P P P G M L M S H H N S Y - - - N R N P N A A A A V L M
gm012069_Glyma0    M D A R E - - - - - - - - - - - - - - - - - - - - - - - - P L R P P P P T I M A G P T S Y G S A N I G P N S S A T V S A
 
AT4G17950.1     G H N T S T S Q A M H Q R L P F G G S M S P H Q P Q Q H Q Y H H P Q P Q Q Q I D Q K T L E S L G F D G S P S S V A A T Q
gm012069_Glyma0    M L A P A T A Q - - - - - F P F A A V - - - - - P Q Q H Q - - - P P P S S E - - - - P F P A S A Y D G S S S P M K A C -
 
AT4G17950.1     Q H S M R F G I D H Q Q V K K K R G R P R K Y A A D G G G G G G G G S N I A L G L A P T S P L P S A S N S Y G G G N E G
gm012069_Glyma0    - - - - - - - - - - S L A K K K R G R P R K Y S P D G - - - - - - - - N I A L R L A P T H A S P P A A A S - - - - - G G
 
AT4G17950.1     G G G G D S A G A N A N S S D P P A K R N R G R P P G S G K K Q L D A L G G T G G V G F T P H V I E V K T G E D I A T K
gm012069_Glyma0    G G G G D S A G - - M A S A D A P A K K H R G R P P G S G K K Q L D A L G A - G G V G F T P H V I L V E S G E D I T A K
 
AT4G17950.1     I L A F T N Q G P R A I C I L S A T G A V T N V M L R Q A N N S N P T G T V K Y E G R F E I I S L S G S F L N S E S N G
gm012069_Glyma0    I M A F S Q Q G P R T V C I L S A I G A I G N V T L Q Q S A M T G - - G I A T Y E G R F E I I S L S G S L Q Q S E N N S
 
AT4G17950.1     T V T K T G N L S V S L A G H E G R I V G G C V D G M L V A G S Q V Q V I V G S F V P D G R K Q K Q S A G R A Q N T P E
gm012069_Glyma0    E R S R T C T L N V T L A G S D G R V L G G G V A G T L I A A S T V Q V I V G S F I A D A K K S S S N A L K S G S S S A
 
AT4G17950.1     P A S A P A N M L S F G G V G G P G S P R S Q G Q Q H S S E S S E E N E S N S P L H R R S N N N N S N N H G I F G N S T
gm012069_Glyma0    P - - - P P Q M L T F G S S M T P N S P T S Q G P - - S T E S S E E - Q D H S P F C R - - G P G P G S G H G L Y N N A S
 
AT4G17950.1     P Q P L H Q I P M Q M Y Q N L W P G N S P Q
gm012069_Glyma0    - Q P V H N M P M - Y H H P L W A G Q S H Q
 
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