fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012227 not found in 321aa AT4G17980.1 not_1st 0.558365758 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17980.1     MGSSCLPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNR
pt012227_POPTR_ MGGASLPPGFRFHPTDEELVGYYLHRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
                **.:.**************:**** **:************************ *****:*

AT4G17980.1     DLEWFFFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRA
pt012227_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATQAGYWKATGKDRKVVCQSA--VTGYRKTLVFYRGRA
                *:*********:**.*********:************:.*:*:  ::*********.***

AT4G17980.1     PLGDRTNWFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKKNE-------------LKKNS
pt012227_POPTR_ PLGDRTDWVMHEYRLC--DDLSQGSPNFKGAFALCRVVKKNEQGLKMSDPQGEPKAKKVG
                ******:*.*******  ** ** ******************              ** .

AT4G17980.1     KSLKN--------KNEQ---------------DIGSCYSSLATSPCRDEASQIQSFKP-S
pt012227_POPTR_ SSSSNVDFTSNVVSNEPSNISFGMSSQASYLYNNGNQYSTPIASPY--QVTTVSELEPAA
                .* .*        .**                : *. **:  :**   :.: :..::* :

AT4G17980.1     STTNDSSSIWISPDFILDSSK-DYPQIKEV----------ASECFPNYHFPVTTAN--HH
pt012227_POPTR_ SLESNPPSHWISPELILDSSKYEYPSSMNTWQPDTHGEFSPGSSYSNFTGEIEHADDLSH
                *  .:..* ****::****** :**.  :.          ....:.*:   :  *:   *

AT4G17980.1     VEF--PLQE------------MLVRS-
pt012227_POPTR_ IGFMSPYSEHGNYMGFGGNDDMHYQGY
                : *  * .*            *  :.
BoxShade v3.31 C (beta, 970507) Output
AT4G17980.1     M G S S C L P P G F R F H P T D E E L I G Y Y L S R K I E G L E I E L E V I P V I D L Y K F D P W E L P G K S F L P N R
pt012227_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L H R K V E G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT4G17980.1     D L E W F F F C P R D K K Y A N G S R T N R A T K A G Y W K A T G K D R K I T C K S S H V I A G Y R K T L V F Y E G R A
pt012227_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T Q A G Y W K A T G K D R K V V C Q S A - - V T G Y R K T L V F Y R G R A
 
AT4G17980.1     P L G D R T N W F M H E Y R L C D I D D H S Q K S P N F K G A F A L C R V V K K N E - - - - - - - - - - - - - L K K N S
pt012227_POPTR_    P L G D R T D W V M H E Y R L C - - D D L S Q G S P N F K G A F A L C R V V K K N E Q G L K M S D P Q G E P K A K K V G
 
AT4G17980.1     K S L K N - - - - - - - - K N E Q - - - - - - - - - - - - - - - D I G S C Y S S L A T S P C R D E A S Q I Q S F K P - S
pt012227_POPTR_    S S S S N V D F T S N V V S N E P S N I S F G M S S Q A S Y L Y N N G N Q Y S T P I A S P Y - - Q V T T V S E L E P A A
 
AT4G17980.1     S T T N D S S S I W I S P D F I L D S S K - D Y P Q I K E V - - - - - - - - - - A S E C F P N Y H F P V T T A N - - H H
pt012227_POPTR_    S L E S N P P S H W I S P E L I L D S S K Y E Y P S S M N T W Q P D T H G E F S P G S S Y S N F T G E I E H A D D L S H
 
AT4G17980.1     V E F - - P L Q E - - - - - - - - - - - - M L V R S -
pt012227_POPTR_    I G F M S P Y S E H G N Y M G F G G N D D M H Y Q G Y
 
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