fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032744 not found in 371aa AT4G17980.1 1st_1st 0.601167315 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17980.1     MGSSCLPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNR
pt032744_POPTR_ MGGASLPPGFRFHPTDEELVGYYLQRKAQGLEIELEVIPVIDLYKFDPWELPEKSFLPKR
                **.:.**************:****.** :*********************** *****:*

AT4G17980.1     DLEWFFFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRA
pt032744_POPTR_ DMEWFFFCPRDRKYPNGSRTNRATKSGYWKATGKDRKVVCKSA--VTGYRKTLVFYRGRA
                *:*********:**.**********:***********:.***:  ::*********.***

AT4G17980.1     PLGDRTNWFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKKNELK-KNSKSLKNKNEQDIG
pt032744_POPTR_ PLGDRTDWVMHEYRLC--DDISQGSPNLKGAFALCHVVKKNEQGLKISDSQGEPKAKQVG
                ******:*.*******  ** ** ***:*******:******   * *.*  : : :::*

AT4G17980.1     SC-----------------------------------YSSLATSPCRDEASQIQSFKPSS
pt032744_POPTR_ SSSSNVDFTSAVISNEPSNISFDMSSQASYLYNNESRYSSPITSPY--QVAPMSDFEPAA
                *.                                   ***  ***   :.: :..*:*::

AT4G17980.1     TTND-SSSIWISPDFILDSSKDYPQIKEVASECFPNYHFPVTT----ANHHVEF------
pt032744_POPTR_ SMESYPSSHWISPDLILDSSKDYSQVHETAAQYLPQYEYPISMNTWQPDRHREFSPGSSH
                : :. .** *****:********.*::*.*:: :*:*.:*::     .::* **      

AT4G17980.1     ------------------------------------------------PL----------
pt032744_POPTR_ SNFTGEIEPPDDLSHIGFMSPYSGHGNYLGFGGNDDMHYQGFEPRNQAPICKQASGDGSL
                                                                *:          

AT4G17980.1     --------QE--MLVRS
pt032744_POPTR_ GEYGGLWSQEDNMVIVI
                        **  *::
BoxShade v3.31 C (beta, 970507) Output
AT4G17980.1     M G S S C L P P G F R F H P T D E E L I G Y Y L S R K I E G L E I E L E V I P V I D L Y K F D P W E L P G K S F L P N R
pt032744_POPTR_    M G G A S L P P G F R F H P T D E E L V G Y Y L Q R K A Q G L E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT4G17980.1     D L E W F F F C P R D K K Y A N G S R T N R A T K A G Y W K A T G K D R K I T C K S S H V I A G Y R K T L V F Y E G R A
pt032744_POPTR_    D M E W F F F C P R D R K Y P N G S R T N R A T K S G Y W K A T G K D R K V V C K S A - - V T G Y R K T L V F Y R G R A
 
AT4G17980.1     P L G D R T N W F M H E Y R L C D I D D H S Q K S P N F K G A F A L C R V V K K N E L K - K N S K S L K N K N E Q D I G
pt032744_POPTR_    P L G D R T D W V M H E Y R L C - - D D I S Q G S P N L K G A F A L C H V V K K N E Q G L K I S D S Q G E P K A K Q V G
 
AT4G17980.1     S C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y S S L A T S P C R D E A S Q I Q S F K P S S
pt032744_POPTR_    S S S S N V D F T S A V I S N E P S N I S F D M S S Q A S Y L Y N N E S R Y S S P I T S P Y - - Q V A P M S D F E P A A
 
AT4G17980.1     T T N D - S S S I W I S P D F I L D S S K D Y P Q I K E V A S E C F P N Y H F P V T T - - - - A N H H V E F - - - - - -
pt032744_POPTR_    S M E S Y P S S H W I S P D L I L D S S K D Y S Q V H E T A A Q Y L P Q Y E Y P I S M N T W Q P D R H R E F S P G S S H
 
AT4G17980.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P L - - - - - - - - - -
pt032744_POPTR_    S N F T G E I E P P D D L S H I G F M S P Y S G H G N Y L G F G G N D D M H Y Q G F E P R N Q A P I C K Q A S G D G S L
 
AT4G17980.1     - - - - - - - - Q E - - M L V R S
pt032744_POPTR_    G E Y G G L W S Q E D N M V I V I
 
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