fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021119 not found in 431aa AT4G17980.1 1st_1st 0.472762645 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17980.1     MGSSCLPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNR
Sb021119_Sorbi1 MGTMTLPPGFRFHPTDDELVGYYLKRKVDNLKIELEVIPVIDLYKSEPWELPEKSFLPKR
                **:  ***********:**:****.**::.*:************* :***** *****:*

AT4G17980.1     DLEWFFFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRA
Sb021119_Sorbi1 DLEWFFFCPRDRKYPNGSRTNRATTTGYWKATGKDRRIACDGG--VYGLRKTLVFYRGRA
                ***********:**.*********.:**********:*:*...  : * *******.***

AT4G17980.1     PLGDRTNWFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKKNELK--------------KN
Sb021119_Sorbi1 PGGERTDWVMHEYRLC--QDIAHGACNFIGAYALCRVIKRHELQGGEPPAGSRAKGAAAS
                * *:**:*.*******  :* :: : ** **:*****:*::**:               .

AT4G17980.1     SKSLKNKNEQDIGSCYSSLATSPCRDEASQIQ-SFKPS----------------------
Sb021119_Sorbi1 SSSGSARGQMSKVSSSSSLVTS------EQLSASFTPSNSNSPPPTLDVGMFQFQSPVGV
                *.* . :.: .  *. ***.**      .*:. **.**                      

AT4G17980.1     --------STTNDSSSIW--ISPDFILDSS--------KDYPQI----------------
Sb021119_Sorbi1 GYAGVTATATTGTGGLPWSPLPPPLLLSSSPHDTFFIGDDFPATAADESRSHAHLFGGDI
                        :**. ..  *  :.* ::*.**        .*:*                  

AT4G17980.1     --------KEVASECFPN-YHFPVTTANHHVEFPLQEMLVRS------------------
Sb021119_Sorbi1 MGLGSISEHELKWDSFPNTFSSGADTWNTAAVAASPTMLCRQASDGIEDLAAIFFPDDNR
                        :*:  :.*** :   . * *  .  .   ** *.                  

AT4G17980.1     ---
Sb021119_Sorbi1 IVF
BoxShade v3.31 C (beta, 970507) Output
AT4G17980.1     M G S S C L P P G F R F H P T D E E L I G Y Y L S R K I E G L E I E L E V I P V I D L Y K F D P W E L P G K S F L P N R
Sb021119_Sorbi1    M G T M T L P P G F R F H P T D D E L V G Y Y L K R K V D N L K I E L E V I P V I D L Y K S E P W E L P E K S F L P K R
 
AT4G17980.1     D L E W F F F C P R D K K Y A N G S R T N R A T K A G Y W K A T G K D R K I T C K S S H V I A G Y R K T L V F Y E G R A
Sb021119_Sorbi1    D L E W F F F C P R D R K Y P N G S R T N R A T T T G Y W K A T G K D R R I A C D G G - - V Y G L R K T L V F Y R G R A
 
AT4G17980.1     P L G D R T N W F M H E Y R L C D I D D H S Q K S P N F K G A F A L C R V V K K N E L K - - - - - - - - - - - - - - K N
Sb021119_Sorbi1    P G G E R T D W V M H E Y R L C - - Q D I A H G A C N F I G A Y A L C R V I K R H E L Q G G E P P A G S R A K G A A A S
 
AT4G17980.1     S K S L K N K N E Q D I G S C Y S S L A T S P C R D E A S Q I Q - S F K P S - - - - - - - - - - - - - - - - - - - - - -
Sb021119_Sorbi1    S S S G S A R G Q M S K V S S S S S L V T S - - - - - - E Q L S A S F T P S N S N S P P P T L D V G M F Q F Q S P V G V
 
AT4G17980.1     - - - - - - - - S T T N D S S S I W - - I S P D F I L D S S - - - - - - - - K D Y P Q I - - - - - - - - - - - - - - - -
Sb021119_Sorbi1    G Y A G V T A T A T T G T G G L P W S P L P P P L L L S S S P H D T F F I G D D F P A T A A D E S R S H A H L F G G D I
 
AT4G17980.1     - - - - - - - - K E V A S E C F P N - Y H F P V T T A N H H V E F P L Q E M L V R S - - - - - - - - - - - - - - - - - -
Sb021119_Sorbi1    M G L G S I S E H E L K W D S F P N T F S S G A D T W N T A A V A A S P T M L C R Q A S D G I E D L A A I F F P D D N R
 
AT4G17980.1     - - -
Sb021119_Sorbi1    I V F
 
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