fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012084 not found in 330aa AT4G17980.1 not_1st 0.552529182 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17980.1     MGSSCLPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNR
gm012084_Glyma0 MGGATLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPKR
                **.: **************:****.**:**************:********* *****:*

AT4G17980.1     DLEWFFFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRA
gm012084_Glyma0 DLEWFFFCPRDRKYPNGSRTNRATKAGYWKAT---------------GYRKTLVFYLGRA
                ***********:**.*****************               ********* ***

AT4G17980.1     PLGDRTNWFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKKN-------------------
gm012084_Glyma0 PMGDRTDWVMHEYRLC--DDLGQATPCFQGGFALCRVIKKNVKASVSQGEHKGKRAGSSS
                *:****:*.*******  ** .* :* *:*.******:***                   

AT4G17980.1     ------ELKKNSKSLKNKNEQ-------DIGSCYSSLATSPCRDEASQIQSFKPSSTTND
gm012084_Glyma0 INGSDTSVKFSSEPFSNSGDASSQASHLNKESRYSSPITSPY--NVAPMGEYNQASVETN
                      .:* .*:.:.*..:        :  * ***  ***   :.: : .:: :*. .:

AT4G17980.1     SSSIWISPDFILDSSKDYPQIKEVASECFPNYHFP-----------------VTTANHHV
gm012084_Glyma0 PSNFWISPDMILDSSKDYPPLQNAVAECFPRYDLPSVMAPWQSLEHPETSSSLSYSNFNV
                .*.:*****:********* :::..:****.*.:*                 :: :*.:*

AT4G17980.1     EFPLQEMLVRS--------------------------------------
gm012084_Glyma0 EVDFADSLSQIGCMSPYSRQWNSMDFYGNGNVPYDGYDQTNSISYPELF
                *. : : * :
BoxShade v3.31 C (beta, 970507) Output
AT4G17980.1     M G S S C L P P G F R F H P T D E E L I G Y Y L S R K I E G L E I E L E V I P V I D L Y K F D P W E L P G K S F L P N R
gm012084_Glyma0    M G G A T L P P G F R F H P T D E E L V G Y Y L K R K V E G L E I E L E V I P V I D F Y K F D P W E L P E K S F L P K R
 
AT4G17980.1     D L E W F F F C P R D K K Y A N G S R T N R A T K A G Y W K A T G K D R K I T C K S S H V I A G Y R K T L V F Y E G R A
gm012084_Glyma0    D L E W F F F C P R D R K Y P N G S R T N R A T K A G Y W K A T - - - - - - - - - - - - - - - G Y R K T L V F Y L G R A
 
AT4G17980.1     P L G D R T N W F M H E Y R L C D I D D H S Q K S P N F K G A F A L C R V V K K N - - - - - - - - - - - - - - - - - - -
gm012084_Glyma0    P M G D R T D W V M H E Y R L C - - D D L G Q A T P C F Q G G F A L C R V I K K N V K A S V S Q G E H K G K R A G S S S
 
AT4G17980.1     - - - - - - E L K K N S K S L K N K N E Q - - - - - - - D I G S C Y S S L A T S P C R D E A S Q I Q S F K P S S T T N D
gm012084_Glyma0    I N G S D T S V K F S S E P F S N S G D A S S Q A S H L N K E S R Y S S P I T S P Y - - N V A P M G E Y N Q A S V E T N
 
AT4G17980.1     S S S I W I S P D F I L D S S K D Y P Q I K E V A S E C F P N Y H F P - - - - - - - - - - - - - - - - - V T T A N H H V
gm012084_Glyma0    P S N F W I S P D M I L D S S K D Y P P L Q N A V A E C F P R Y D L P S V M A P W Q S L E H P E T S S S L S Y S N F N V
 
AT4G17980.1     E F P L Q E M L V R S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm012084_Glyma0    E V D F A D S L S Q I G C M S P Y S R Q W N S M D F Y G N G N V P Y D G Y D Q T N S I S Y P E L F
 
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