fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G17980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047190 not found in 302aa AT4G17980.1 1st_1st 0.622568093 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G17980.1     MGSSCLPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNR
gm047190_Glyma1 MGGATLPPGFRFHPTDEELVGYYLKRKVEGIEIELEVIPVIDLYKFDPWELPEKSFLPKR
                **.: **************:****.**:**:********************* *****:*

AT4G17980.1     DLEWFFFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRA
gm047190_Glyma1 DLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSNPSTVGYRKTLVFYLGRA
                ***********:**.**********************:.*:*.   .********* ***

AT4G17980.1     PLGDRTNWFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKKNELKKNSKSLKNKNEQDIGS
gm047190_Glyma1 PLGDRTDWVMHEYRLC--DDLGQATPCFQGGFALCRVIKKNE--------KAMSHSATLS
                ******:*.*******  ** .* :* *:*.******:****        *  ...   *

AT4G17980.1     CYSSLATSPCRDEASQIQSFKPSST-TNDSSSIWISPDFILDSSKDYPQIKEVASECFPN
gm047190_Glyma1 RYSSPITSPY--NVAPMGEFNQASVETTNPSNFWISPDMILDSSKDYSQLQNAMAECFPR
                 ***  ***   :.: : .*: :*. *.:.*.:*****:********.*:::. :****.

AT4G17980.1     YHFPVTTA-------------------NHHVEFP--LQEM--------------------
gm047190_Glyma1 YDLPSVMAPWQSLEHPETSSSLSYSNFNGEVEFADNLSQIGCTRQWNSMDLYGNGDVPYD
                *.:* . *                   * .***.  *.::                    

AT4G17980.1     ---LVRS-------
gm047190_Glyma1 GYDQVNSISYPEPF
                    *.*
BoxShade v3.31 C (beta, 970507) Output
AT4G17980.1     M G S S C L P P G F R F H P T D E E L I G Y Y L S R K I E G L E I E L E V I P V I D L Y K F D P W E L P G K S F L P N R
gm047190_Glyma1    M G G A T L P P G F R F H P T D E E L V G Y Y L K R K V E G I E I E L E V I P V I D L Y K F D P W E L P E K S F L P K R
 
AT4G17980.1     D L E W F F F C P R D K K Y A N G S R T N R A T K A G Y W K A T G K D R K I T C K S S H V I A G Y R K T L V F Y E G R A
gm047190_Glyma1    D L E W F F F C P R D R K Y P N G S R T N R A T K A G Y W K A T G K D R K V V C Q S N P S T V G Y R K T L V F Y L G R A
 
AT4G17980.1     P L G D R T N W F M H E Y R L C D I D D H S Q K S P N F K G A F A L C R V V K K N E L K K N S K S L K N K N E Q D I G S
gm047190_Glyma1    P L G D R T D W V M H E Y R L C - - D D L G Q A T P C F Q G G F A L C R V I K K N E - - - - - - - - K A M S H S A T L S
 
AT4G17980.1     C Y S S L A T S P C R D E A S Q I Q S F K P S S T - T N D S S S I W I S P D F I L D S S K D Y P Q I K E V A S E C F P N
gm047190_Glyma1    R Y S S P I T S P Y - - N V A P M G E F N Q A S V E T T N P S N F W I S P D M I L D S S K D Y S Q L Q N A M A E C F P R
 
AT4G17980.1     Y H F P V T T A - - - - - - - - - - - - - - - - - - - N H H V E F P - - L Q E M - - - - - - - - - - - - - - - - - - - -
gm047190_Glyma1    Y D L P S V M A P W Q S L E H P E T S S S L S Y S N F N G E V E F A D N L S Q I G C T R Q W N S M D L Y G N G D V P Y D
 
AT4G17980.1     - - - L V R S - - - - - - -
gm047190_Glyma1    G Y D Q V N S I S Y P E P F
 
0