fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036964 not found in 255aa AT4G18450.1 1st_1st 0.225210084 Ib
Pt019967 not found in 276aa AT4G18450.1 1st_1st 0.252100840 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18450.1     MAFGNIQELDGE-ILKNVWANYIGTPQTD-TRSIQVPEVSRTWEALPTLDDIPEGSREML
gm036964_Glyma1 MDIHSNHGATSEGILENVWAKIMSSDGAD-GRKGDAAESSNSWEELPNLDG-REGSMEIL
pt019967_POPTR_ MTIQSDHRAASEGILENVWASYIGEDRGDIGISNSEQEVSKSWQDLPSLDR-RDESMEAL
                * : . :   .* **:****. :.    *   . .  * *.:*: **.**   : * * *

AT4G18450.1     QSLD-----MSTEDQEWTEILDAIA-SFPNKTN-HDPLTNPTIDS-CSLSSRVSCK---T
gm036964_Glyma1 QRLPSLGRWISMGADFWEEVLDGII--LPNTSNREDSSHNN-----LEIGSANETQKAIT
pt019967_POPTR_ QRLPSLGRWISMGAETWEELLDGIIPEINDTCN--DSAENKGPSSLSSKASAVKVEKVTT
                * *      :*   : * *:**.*   : :. *  *.  *       . .*  . :   *

AT4G18450.1     RKYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNF
gm036964_Glyma1 KHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGP-KAYLNF
pt019967_POPTR_ RHYRGVRRRPWGKYAAEIRDSSRKGARVWLGTFETAEEAALAYDKAALRIRGP-KTYLNF
                ::*****:*****:*******:::*.*******:******:******:****. *:: **

AT4G18450.1     QLETVIKAMEMDCNPNYYRMNNSNTSDPLRSSRKIGLRTGKEAVKAYDEVVDGMVENHCA
gm036964_Glyma1 PLERGANALACD--------------------HKGT--------------------NHLA
pt019967_POPTR_ PLETVAKAMCIDC--------SKNDSNVLSTTNSQG--------------------NNTS
                 **   :*:  *                    ..                      *: :

AT4G18450.1     LSYCSTKEHSETRGLRGSEETWFDLRKRRRS-------NEDSMCQEVEMQKTVTGEETVC
gm036964_Glyma1 CTCIGNKEKL--------------INSRKRASMEREA-FDDMVNEQPA---TKKLECMVE
pt019967_POPTR_ CTFPGSSDKVS-------------VIHRKRASRDWEVKSESTMMEQPGLKRTARVEELYA
                 :  ...::               :  *:*:        :. : ::     *   *    

AT4G18450.1     DVFGLFEFEDLGSDYLETLLSSF
gm036964_Glyma1 NELGAFVFQDLGSDYLDSLLSSF
pt019967_POPTR_ NDV--VEFQDLGSDYLDSLLSSF
                : .  . *:*******::*****
BoxShade v3.31 C (beta, 970507) Output
AT4G18450.1     M A F G N I Q E L D G E - I L K N V W A N Y I G T P Q T D - T R S I Q V P E V S R T W E A L P T L D D I P E G S R E M L
gm036964_Glyma1    M D I H S N H G A T S E G I L E N V W A K I M S S D G A D - G R K G D A A E S S N S W E E L P N L D G - R E G S M E I L
pt019967_POPTR_    M T I Q S D H R A A S E G I L E N V W A S Y I G E D R G D I G I S N S E Q E V S K S W Q D L P S L D R - R D E S M E A L
 
AT4G18450.1     Q S L D - - - - - M S T E D Q E W T E I L D A I A - S F P N K T N - H D P L T N P T I D S - C S L S S R V S C K - - - T
gm036964_Glyma1    Q R L P S L G R W I S M G A D F W E E V L D G I I - - L P N T S N R E D S S H N N - - - - - L E I G S A N E T Q K A I T
pt019967_POPTR_    Q R L P S L G R W I S M G A E T W E E L L D G I I P E I N D T C N - - D S A E N K G P S S L S S K A S A V K V E K V T T
 
AT4G18450.1     R K Y R G V R K R P W G K F A A E I R D S T R N G V R V W L G T F Q T A E E A A M A Y D K A A V R I R G T Q K A H T N F
gm036964_Glyma1    K H Y R G V R R R P W G K Y A A E I R D S S K K G A R V W L G T F D T A E E A A L A Y D K A A L R I R G P - K A Y L N F
pt019967_POPTR_    R H Y R G V R R R P W G K Y A A E I R D S S R K G A R V W L G T F E T A E E A A L A Y D K A A L R I R G P - K T Y L N F
 
AT4G18450.1     Q L E T V I K A M E M D C N P N Y Y R M N N S N T S D P L R S S R K I G L R T G K E A V K A Y D E V V D G M V E N H C A
gm036964_Glyma1    P L E R G A N A L A C D - - - - - - - - - - - - - - - - - - - - H K G T - - - - - - - - - - - - - - - - - - - - N H L A
pt019967_POPTR_    P L E T V A K A M C I D C - - - - - - - - S K N D S N V L S T T N S Q G - - - - - - - - - - - - - - - - - - - - N N T S
 
AT4G18450.1     L S Y C S T K E H S E T R G L R G S E E T W F D L R K R R R S - - - - - - - N E D S M C Q E V E M Q K T V T G E E T V C
gm036964_Glyma1    C T C I G N K E K L - - - - - - - - - - - - - - I N S R K R A S M E R E A - F D D M V N E Q P A - - - T K K L E C M V E
pt019967_POPTR_    C T F P G S S D K V S - - - - - - - - - - - - - V I H R K R A S R D W E V K S E S T M M E Q P G L K R T A R V E E L Y A
 
AT4G18450.1     D V F G L F E F E D L G S D Y L E T L L S S F
gm036964_Glyma1    N E L G A F V F Q D L G S D Y L D S L L S S F
pt019967_POPTR_    N D V - - V E F Q D L G S D Y L D S L L S S F
 
0