fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019967 not found in 276aa AT4G18450.1 1st_1st 0.252100840 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18450.1     MAFGNIQELDGE-ILKNVWANYIGTPQTD---TRSIQVPEVSRTWEALPTLDDIPEGSRE
pt019967_POPTR_ MTIQSDHRAASEGILENVWASYIGEDRGDIGISNSEQ--EVSKSWQDLPSLDRRDE-SME
                *:: . :.  .* **:****.***  : *   :.* *  ***::*: **:**   * * *

AT4G18450.1     MLQSLD-----MSTEDQEWTEILDAIASFPNKTNHDPLTN--PTIDSCSLSSRVSC----
pt019967_POPTR_ ALQRLPSLGRWISMGAETWEELLDGIIPEINDTCNDSAENKGPS----SLSSKASAVKVE
                 ** *      :*   : * *:**.* .  *.* :*.  *  *:    ****:.*.    

AT4G18450.1     --KTRKYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKA
pt019967_POPTR_ KVTTRHYRGVRRRPWGKYAAEIRDSSRKGARVWLGTFETAEEAALAYDKAALRIRGP-KT
                  .**:*****:*****:*******:*:*.*******:******:******:****. *:

AT4G18450.1     HTNFQLETVIKAMEMDCNPNYYRMNNSNTSDPLRSSRKIGLRTGKEAVKAYDEVVDGMVE
pt019967_POPTR_ YLNFPLETVAKAMCIDCSK-----NDSNV-------------------------------
                : ** **** *** :**.      *:**.                               

AT4G18450.1     NHCALSYCSTKEHSETRGLRGSEETWFDLRKRRRS------NEDSMCQEVEMQKTVTGEE
pt019967_POPTR_ ----LSTTNSQGNNTSCTFPGSSDKVSVIHRKRASRDWEVKSESTMMEQPGLKRTARVEE
                    **  .:: :. :  : **.:.   ::::* *      .*.:* ::  :::*.  **

AT4G18450.1     TVCDVFGLFEFEDLGSDYLETLLSSF
pt019967_POPTR_ LYAN--DVVEFQDLGSDYLDSLLSSF
                  .:  .:.**:*******::*****
BoxShade v3.31 C (beta, 970507) Output
AT4G18450.1     M A F G N I Q E L D G E - I L K N V W A N Y I G T P Q T D - - - T R S I Q V P E V S R T W E A L P T L D D I P E G S R E
pt019967_POPTR_    M T I Q S D H R A A S E G I L E N V W A S Y I G E D R G D I G I S N S E Q - - E V S K S W Q D L P S L D R R D E - S M E
 
AT4G18450.1     M L Q S L D - - - - - M S T E D Q E W T E I L D A I A S F P N K T N H D P L T N - - P T I D S C S L S S R V S C - - - -
pt019967_POPTR_    A L Q R L P S L G R W I S M G A E T W E E L L D G I I P E I N D T C N D S A E N K G P S - - - - S L S S K A S A V K V E
 
AT4G18450.1     - - K T R K Y R G V R K R P W G K F A A E I R D S T R N G V R V W L G T F Q T A E E A A M A Y D K A A V R I R G T Q K A
pt019967_POPTR_    K V T T R H Y R G V R R R P W G K Y A A E I R D S S R K G A R V W L G T F E T A E E A A L A Y D K A A L R I R G P - K T
 
AT4G18450.1     H T N F Q L E T V I K A M E M D C N P N Y Y R M N N S N T S D P L R S S R K I G L R T G K E A V K A Y D E V V D G M V E
pt019967_POPTR_    Y L N F P L E T V A K A M C I D C S K - - - - - N D S N V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G18450.1     N H C A L S Y C S T K E H S E T R G L R G S E E T W F D L R K R R R S - - - - - - N E D S M C Q E V E M Q K T V T G E E
pt019967_POPTR_    - - - - L S T T N S Q G N N T S C T F P G S S D K V S V I H R K R A S R D W E V K S E S T M M E Q P G L K R T A R V E E
 
AT4G18450.1     T V C D V F G L F E F E D L G S D Y L E T L L S S F
pt019967_POPTR_    L Y A N - - D V V E F Q D L G S D Y L D S L L S S F
 
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