fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036964 not found in 255aa AT4G18450.1 1st_1st 0.225210084 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18450.1     MAFGNIQELDGE----ILKNVWANYIGTPQTDTRSIQVPEVSRTWEALPTLDDIPEGSRE
gm036964_Glyma1 ---MDIHSNHGATSEGILENVWAKIMSSDGADGRKGDAAESSNSWEELPNLDG-REGSME
                    :*:. .*     **:****: :.:  :* *. :..* *.:** **.**.  *** *

AT4G18450.1     MLQSLD-----MSTEDQEWTEILDAIASFPNKTNHDPLTNPTIDSCSLSSRVSCKTRKYR
gm036964_Glyma1 ILQRLPSLGRWISMGADFWEEVLDGII-LPNTSNREDSSHNNLEIGSANETQKAITKHYR
                :** *      :*   : * *:**.*  :**.:*::  :: .::  * ..  .. *::**

AT4G18450.1     GVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNFQLET
gm036964_Glyma1 GVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGP-KAYLNFPLER
                ***:*****:*******:::*.*******:******:******:****. **: ** ** 

AT4G18450.1     VIKAMEMDCNPNYYRMNNSNTSDPLRSSRKIGLRTGKEAVKAYDEVVDGMVENHCALSYC
gm036964_Glyma1 GANALACD---------HKGT-------------------------------NHLA---C
                  :*:  *         :..*                               ** *   *

AT4G18450.1     STKEHSETRGLRGSEETWFDLRKR---RRSNEDSMCQEVEMQKTVTGEETVCDVFGLFEF
gm036964_Glyma1 TCI---------GNKEKLINSRKRASMEREAFDDMVNEQPATKKL--ECMVENELGAFVF
                :           *.:*. :: ***   .*.  *.* :*    *.:  *  * : :* * *

AT4G18450.1     EDLGSDYLETLLSSF
gm036964_Glyma1 QDLGSDYLDSLLSSF
                :*******::*****
BoxShade v3.31 C (beta, 970507) Output
AT4G18450.1     M A F G N I Q E L D G E - - - - I L K N V W A N Y I G T P Q T D T R S I Q V P E V S R T W E A L P T L D D I P E G S R E
gm036964_Glyma1    - - - M D I H S N H G A T S E G I L E N V W A K I M S S D G A D G R K G D A A E S S N S W E E L P N L D G - R E G S M E
 
AT4G18450.1     M L Q S L D - - - - - M S T E D Q E W T E I L D A I A S F P N K T N H D P L T N P T I D S C S L S S R V S C K T R K Y R
gm036964_Glyma1    I L Q R L P S L G R W I S M G A D F W E E V L D G I I - L P N T S N R E D S S H N N L E I G S A N E T Q K A I T K H Y R
 
AT4G18450.1     G V R K R P W G K F A A E I R D S T R N G V R V W L G T F Q T A E E A A M A Y D K A A V R I R G T Q K A H T N F Q L E T
gm036964_Glyma1    G V R R R P W G K Y A A E I R D S S K K G A R V W L G T F D T A E E A A L A Y D K A A L R I R G P - K A Y L N F P L E R
 
AT4G18450.1     V I K A M E M D C N P N Y Y R M N N S N T S D P L R S S R K I G L R T G K E A V K A Y D E V V D G M V E N H C A L S Y C
gm036964_Glyma1    G A N A L A C D - - - - - - - - - H K G T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N H L A - - - C
 
AT4G18450.1     S T K E H S E T R G L R G S E E T W F D L R K R - - - R R S N E D S M C Q E V E M Q K T V T G E E T V C D V F G L F E F
gm036964_Glyma1    T C I - - - - - - - - - G N K E K L I N S R K R A S M E R E A F D D M V N E Q P A T K K L - - E C M V E N E L G A F V F
 
AT4G18450.1     E D L G S D Y L E T L L S S F
gm036964_Glyma1    Q D L G S D Y L D S L L S S F
 
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