fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027738 not found in 436aa AT4G18770.1 1st_1st 0.385620915 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18770.1     MENFVDENGFASLNQNIFTRDQEHMKEEDFPFEVVDQSKPTS--FLQDFHHLDHDHQFDH
pt027738_POPTR_ ----------------MFLSNKPYMKEDYFPFETVPAS-PSSKGFLQDFDHLDDDH--DS
                                :*  :: :***: ****.*  * *:*  *****.***.**  * 

AT4G18770.1     HHHHGSSSSHPLLSVQTTSSCINNAPFEHCSYQ-ENMVDF--YETKPNLMN------HHH
pt027738_POPTR_ QFHANGSASNPFFGVQTGS---NFDSFDAFPYGLSSDIDFYDYECKPFVGNINGGGGHGH
                :.* ..*:*:*::.*** *   *  .*:  .*  .. :**  ** ** : *      * *

AT4G18770.1     FQAVEN----SYFTRNHHHHQEINLVDEHDDPMDLEQNNMMMMRMIPFDYPPTETFKPMN
pt027738_POPTR_ GQVNEDLQSGAY----------LNMSCDQRNPIDDIGSNQGHVSL------NFEEITPVS
                 *. *:    :*          :*:  :: :*:*   .*   : :        * :.*:.

AT4G18770.1     FVMPDEISCVS-ADNDCYRATSFNKTKPFL--TRKLSSSSSSSSWKETKKSTLVKGQWTA
pt027738_POPTR_ FVVPDEVSCVSAATNECKRKMGLNKTRALLPPARK--------AWKGPKKNSIVKGQWTT
                **:***:**** * *:* *  .:***:.:*  :**        :** .**.::******:

AT4G18770.1     EEDRVLIQLVEKYGLRKWSHIAQVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIE
pt027738_POPTR_ EEDRILIQLVEQNGVRKWCHVAQMLPGRIGKQCRERWHNHLRPNIKKDTWSVEEDKVLIQ
                ****:******: *:***.*:**:*******************:***:*** ***:***:

AT4G18770.1     FHKEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQFSKRKCRSKYPRPSLLQDYIKSLNM
pt027738_POPTR_ AHSELGNRWAEIAKMLPGRTENSIKNHWNATKRKQYSKRKCRPKYPRASLLQDYIKSLNL
                 *.*:**:****** ******************:*:******.****.***********:

AT4G18770.1     GALMASSVPARGRRRESNNKKKDVVVAVEEKKKEEEVYGQDRI---------VPECVFTD
pt027738_POPTR_ DSGIT------GRGLGITTASTDIILDNDTRMKAPELLPRDLVLFKDNDDGLVPNYSFNE
                .: ::      **    .. ..*:::  : : *  *:  :* :         **:  *.:

AT4G18770.1     --DFGFNEKLLEEGCSIDSLLD----------------DIPQPDIDAFVHGL--------
pt027738_POPTR_ VPDYDIHEKIFRGGCSVDSILDGLPCDDSVAHEKRLEMDVPEPDVTPFM-GFEVKKEVDL
                  *:.::**::. ***:**:**                *:*:**: .*: *:        

AT4G18770.1     ---------
pt027738_POPTR_ LEMISQSKM
BoxShade v3.31 C (beta, 970507) Output
AT4G18770.1     M E N F V D E N G F A S L N Q N I F T R D Q E H M K E E D F P F E V V D Q S K P T S - - F L Q D F H H L D H D H Q F D H
pt027738_POPTR_    - - - - - - - - - - - - - - - - M F L S N K P Y M K E D Y F P F E T V P A S - P S S K G F L Q D F D H L D D D H - - D S
 
AT4G18770.1     H H H H G S S S S H P L L S V Q T T S S C I N N A P F E H C S Y Q - E N M V D F - - Y E T K P N L M N - - - - - - H H H
pt027738_POPTR_    Q F H A N G S A S N P F F G V Q T G S - - - N F D S F D A F P Y G L S S D I D F Y D Y E C K P F V G N I N G G G G H G H
 
AT4G18770.1     F Q A V E N - - - - S Y F T R N H H H H Q E I N L V D E H D D P M D L E Q N N M M M M R M I P F D Y P P T E T F K P M N
pt027738_POPTR_    G Q V N E D L Q S G A Y - - - - - - - - - - L N M S C D Q R N P I D D I G S N Q G H V S L - - - - - - N F E E I T P V S
 
AT4G18770.1     F V M P D E I S C V S - A D N D C Y R A T S F N K T K P F L - - T R K L S S S S S S S S W K E T K K S T L V K G Q W T A
pt027738_POPTR_    F V V P D E V S C V S A A T N E C K R K M G L N K T R A L L P P A R K - - - - - - - - A W K G P K K N S I V K G Q W T T
 
AT4G18770.1     E E D R V L I Q L V E K Y G L R K W S H I A Q V L P G R I G K Q C R E R W H N H L R P D I K K E T W S E E E D R V L I E
pt027738_POPTR_    E E D R I L I Q L V E Q N G V R K W C H V A Q M L P G R I G K Q C R E R W H N H L R P N I K K D T W S V E E D K V L I Q
 
AT4G18770.1     F H K E I G N K W A E I A K R L P G R T E N S I K N H W N A T K R R Q F S K R K C R S K Y P R P S L L Q D Y I K S L N M
pt027738_POPTR_    A H S E L G N R W A E I A K M L P G R T E N S I K N H W N A T K R K Q Y S K R K C R P K Y P R A S L L Q D Y I K S L N L
 
AT4G18770.1     G A L M A S S V P A R G R R R E S N N K K K D V V V A V E E K K K E E E V Y G Q D R I - - - - - - - - - V P E C V F T D
pt027738_POPTR_    D S G I T - - - - - - G R G L G I T T A S T D I I L D N D T R M K A P E L L P R D L V L F K D N D D G L V P N Y S F N E
 
AT4G18770.1     - - D F G F N E K L L E E G C S I D S L L D - - - - - - - - - - - - - - - - D I P Q P D I D A F V H G L - - - - - - - -
pt027738_POPTR_    V P D Y D I H E K I F R G G C S V D S I L D G L P C D D S V A H E K R L E M D V P E P D V T P F M - G F E V K K E V D L
 
AT4G18770.1     - - - - - - - - -
pt027738_POPTR_    L E M I S Q S K M
 
0