fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb000253 not found in 336aa AT4G18770.1 1st_1st 0.273202614 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18770.1     MENFVDENGFASLNQNIFTRDQEHMKEEDFPFEVVDQSKPTSFLQDFHHLDHDHQFDHHH
Sb000253_Sorbi1 ------------------------------------------------------------
                                                                            

AT4G18770.1     HHGSSSSHPLLSVQTTSSCINNAPFEHCSYQENMVDFYETKPNLMNHHHFQAVENSYFTR
Sb000253_Sorbi1 --------------------------------------------MNGR------------
                                                            ** :            

AT4G18770.1     NHHHHQEINLVDEHDDPMDLEQNNMMMMRMIPFDYPPTETFKPMNFVMPDEISCVSADND
Sb000253_Sorbi1 ------------------------------------------------------------
                                                                            

AT4G18770.1     CYRATSFNKTKPFLTRKLSSSSSSSSWKETKKST--LVKGQWTAEEDRVLIQLVEKYGLR
Sb000253_Sorbi1 ------------FLPRKKTS---------LKKANVVVVKGQWTPAEDRKLVKLVEQFGLR
                            **.** :*          **:.  :******. *** *::***::***

AT4G18770.1     KWSHIAQVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRL
Sb000253_Sorbi1 KWSYIAQLLPGRVGKQCRERWHNHLRPNIKKDIWSDEEDMVLIQAHKEVGNKWAEIAKRL
                ***:***:****:**************:***: **:*** ***: ***:***********

AT4G18770.1     PGRTENSIKNHWNATKRRQFSKRKCR-SKYPRP-SLLQDYIKSLNMGA------------
Sb000253_Sorbi1 PGRTENSIKNHWNATKRRQFARRRSRSSKGPKSGTLLQNYIKGLGIAGPSNKTAAAPLPE
                ********************::*:.* ** *:. :***:***.*.:..            

AT4G18770.1     --LMASSVPARGRRRESNNKKKDVVVAVEE----------------------KKKEEEVY
Sb000253_Sorbi1 PTLSPSSLEAPGAK---SAKTDEITLEVEHISMSSNIPDSQGILLLPSIHEYNNCSESQS
                  * .**: * * :   . *..::.: **.                      :: .*.  

AT4G18770.1     GQDRIVPECVFTDDFG-------FNEKLLEEGCSIDSLLDDI-----------------P
Sb000253_Sorbi1 CEDLLAPIC---DEFSVEMCDGLFDTNEDADAFQVYAMDDDIDMNYIFNYIEHAAIKVDP
                 :* :.* *   *:*.       *: :   :. .: :: ***                 *

AT4G18770.1     QPDIDAFVH--------GL----------------------------------------
Sb000253_Sorbi1 EIDMEMMMMMMWDGDDGGLLGCDADPAGPAHVETVHVKEEMDLIEMVAATQNCGEAENH
                : *:: ::         **
BoxShade v3.31 C (beta, 970507) Output
AT4G18770.1     M E N F V D E N G F A S L N Q N I F T R D Q E H M K E E D F P F E V V D Q S K P T S F L Q D F H H L D H D H Q F D H H H
Sb000253_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G18770.1     H H G S S S S H P L L S V Q T T S S C I N N A P F E H C S Y Q E N M V D F Y E T K P N L M N H H H F Q A V E N S Y F T R
Sb000253_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N G R - - - - - - - - - - - -
 
AT4G18770.1     N H H H H Q E I N L V D E H D D P M D L E Q N N M M M M R M I P F D Y P P T E T F K P M N F V M P D E I S C V S A D N D
Sb000253_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G18770.1     C Y R A T S F N K T K P F L T R K L S S S S S S S S W K E T K K S T - - L V K G Q W T A E E D R V L I Q L V E K Y G L R
Sb000253_Sorbi1    - - - - - - - - - - - - F L P R K K T S - - - - - - - - - L K K A N V V V V K G Q W T P A E D R K L V K L V E Q F G L R
 
AT4G18770.1     K W S H I A Q V L P G R I G K Q C R E R W H N H L R P D I K K E T W S E E E D R V L I E F H K E I G N K W A E I A K R L
Sb000253_Sorbi1    K W S Y I A Q L L P G R V G K Q C R E R W H N H L R P N I K K D I W S D E E D M V L I Q A H K E V G N K W A E I A K R L
 
AT4G18770.1     P G R T E N S I K N H W N A T K R R Q F S K R K C R - S K Y P R P - S L L Q D Y I K S L N M G A - - - - - - - - - - - -
Sb000253_Sorbi1    P G R T E N S I K N H W N A T K R R Q F A R R R S R S S K G P K S G T L L Q N Y I K G L G I A G P S N K T A A A P L P E
 
AT4G18770.1     - - L M A S S V P A R G R R R E S N N K K K D V V V A V E E - - - - - - - - - - - - - - - - - - - - - - K K K E E E V Y
Sb000253_Sorbi1    P T L S P S S L E A P G A K - - - S A K T D E I T L E V E H I S M S S N I P D S Q G I L L L P S I H E Y N N C S E S Q S
 
AT4G18770.1     G Q D R I V P E C V F T D D F G - - - - - - - F N E K L L E E G C S I D S L L D D I - - - - - - - - - - - - - - - - - P
Sb000253_Sorbi1    C E D L L A P I C - - - D E F S V E M C D G L F D T N E D A D A F Q V Y A M D D D I D M N Y I F N Y I E H A A I K V D P
 
AT4G18770.1     Q P D I D A F V H - - - - - - - - G L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb000253_Sorbi1    E I D M E M M M M M M W D G D D G G L L G C D A D P A G P A H V E T V H V K E E M D L I E M V A A T Q N C G E A E N H
 
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