fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18890.1 ECVSDDLELTLGNSRT at 272/284 in AT4G18890.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000898 DSGSDDLELTLGSSRT in 351/365 AT1G78700.1 1st_not 0.504149377 II
Sb024553 not found in 526aa AT1G78700.1 1st_not 0.504149377 II
Gm037328 EFGSDDLELTLGNSKT in 314/325 AT1G78700.1 1st_not 0.578838174 II
Pt020395 ECVSDDLELTLGNSNT in 320/331 AT1G78700.1 1st_not 0.653526970 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18890.1     --------MTS-------------------------GTRTPTWKERENNKRRERRRRAIA
gm037328_Glyma1 --------MTS-------------------------GTRLPTSKERENNKRRERRRRAIA
pt020395_POPTR_ --------MTS-------------------------GTRMPTWKERENNKRRERRRRAIA
Os000898_Os01t0 --------MATGGGGGGGGMGGGGVGGGAGAAGVGVGGRMPTWRERENNKRRERRRRAIA
Sb024553_Sorbi1 AGARAGRDMASGGGGGA--------GGGLGAA--GAGGRMPTWRERENNKRRERRRRAIA
                        *::                         * * ** :****************

AT4G18890.1     AKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPMDRMDLMNGST
gm037328_Glyma1 AKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSS
pt020395_POPTR_ AKIYSGLRMYGNYKLPKHCDNNEVLKALCKEAGWTVEEDGTTYRKGCKPVERMDIMGGSA
Os000898_Os01t0 AKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGYKPPERMEVIGCSV
Sb024553_Sorbi1 AKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGSKPMERMDHIGCSV
                ***::*** :*.:****************:****.** ******** ** :**: :. * 

AT4G18890.1     SASPCSSYQHSPRASYNPSPSSSSFPSPTNP------------FGDANSLIPWLKNLSSN
gm037328_Glyma1 AASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTQIP------NADGNSLIPWLKNLSTA
pt020395_POPTR_ SASPCSSYHRSPCASYNPSPASSSFPSPVSSHYAANAN----GNADPNSLIPWLKNLSSG
Os000898_Os01t0 SPSPCSSYQPSPRASYNASPTSSSFPSGASSPFLPHPNNMAN-GVDGNPILPWLKTLSNS
Sb024553_Sorbi1 SPSPCSSYQVSPRASYNASPTSSSFPSGASSPFLP-PNEMVNGGIDGNPILPWLKTFSNG
                :.******: ** ****.** ******  ..              * *.::****.:*. 

AT4G18890.1     SPS----KLP---FFHGNSISAPVTPPL----ARSP---------------TRDQ-----
gm037328_Glyma1 SSSASSPKLP-HLYLHSGSISAPVTPPLSSPTSRTPRINVEWDEQSARPGWTRQQHYSF-
pt020395_POPTR_ SSSA-SPKHPHHLFIHTGSISAPVTPPLSSPTARTPRTKNDWDDAAAGQSWM-GQNYSFM
Os000898_Os01t0 PSSKKHPQLP-PLLIHGGSISAPVTPPLSSPTARTPRMKTDWDESNVQPTWTGSN-----
Sb024553_Sorbi1 TPSKKHPLLP-PLLIHGGSISAPVTPPLSSPSARTPRMKTDWDEATIQPPWHGAN-----
                ..*      *    :* .**********    :*:*                  :     

AT4G18890.1     -VTIP-------------DSGWLSGMQTPQSGPSSPTFSLVSRNPF-FDKEAFKMGDCNS
gm037328_Glyma1 ---LPSSSPPSPGRQVV-DPEWFAGIKLPHVSPTSPTFSLVSSNPFAFKEDG--LPGSGS
pt020395_POPTR_ PSSMPSSTPPSPGRHVLPDSGWLAGIQIPQSGPSSPTFSLVSRNPFGFREEA--LSGAGS
Os000898_Os01t0 SPCVVNSTPPSPGRTMLPDPAWLAGIQISSTSPSSPTFSLVSSNPFSVFKDAILVGNNSS
Sb024553_Sorbi1 SPTIVNSTPPSPGRSIAPDPAWLAGIQISSTSPNSPTFSLVSTNPFSVFKESIPVGNSSS
                   :              *. *::*:: .  .*.******** *** . ::.  : . .*

AT4G18890.1     PMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMA---ANGMVKPWEGERIH
gm037328_Glyma1 RMWTPAQSGTCSPAIPPGSDQNADIPMSEAVSDEFAFGSNTL------GLVKPWEGERIH
pt020395_POPTR_ RMWTPGQSGTCSPAIPAGIDQTADVPMSDSMAAEFAFGSNAA------GLVKPWEGERIH
Os000898_Os01t0 RMCTPGQSGTCSPAIP-GMAPHPDIHMMDAVSDEFAFGSSTNGGHQAAGLVRAWEGERIH
Sb024553_Sorbi1 RMCTPGQSGTCSPAIP-GMLQHSDVHMMDAVSDEFAFGSSTNGAQQAAGLVRAWEGERIH
                 * **.***.****** *    .*: * :.:: *****..:       *:*:.*******

AT4G18890.1     GECVSDDLELTLGNSRTR---
gm037328_Glyma1 EEFGSDDLELTLGNSKTR---
pt020395_POPTR_ EECVSDDLELTLGNSNTR---
Os000898_Os01t0 EDSGSDDLELTLGSSRTRAAA
Sb024553_Sorbi1 EDSGSDDLELTLKL-------
                 :  ********
BoxShade v3.31 C (beta, 970507) Output
AT4G18890.1     - - - - - - - - M T S - - - - - - - - - - - - - - - - - - - - - - - - - G T R T P T W K E R E N N K R R E R R R R A I A
gm037328_Glyma1    - - - - - - - - M T S - - - - - - - - - - - - - - - - - - - - - - - - - G T R L P T S K E R E N N K R R E R R R R A I A
pt020395_POPTR_    - - - - - - - - M T S - - - - - - - - - - - - - - - - - - - - - - - - - G T R M P T W K E R E N N K R R E R R R R A I A
Os000898_Os01t0    - - - - - - - - M A T G G G G G G G G M G G G G V G G G A G A A G V G V G G R M P T W R E R E N N K R R E R R R R A I A
Sb024553_Sorbi1    A G A R A G R D M A S G G G G G A - - - - - - - - G G G L G A A - - G A G G R M P T W R E R E N N K R R E R R R R A I A
 
AT4G18890.1     A K I F A G L R I H G N F K L P K H C D N N E V L K A L C N E A G W T V E D D G T T Y R K G C K P M D R M D L M N G S T
gm037328_Glyma1    A K I F A G L R M Y G N F K L P K H C D N N E V L K A L C N E A G W T V E P D G T T Y R K G C K P L E R M D I V G G S S
pt020395_POPTR_    A K I Y S G L R M Y G N Y K L P K H C D N N E V L K A L C K E A G W T V E E D G T T Y R K G C K P V E R M D I M G G S A
Os000898_Os01t0    A K I F A G L R A H G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G Y K P P E R M E V I G C S V
Sb024553_Sorbi1    A K I F A G L R A H G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G S K P M E R M D H I G C S V
 
AT4G18890.1     S A S P C S S Y Q H S P R A S Y N P S P S S S S F P S P T N P - - - - - - - - - - - - F G D A N S L I P W L K N L S S N
gm037328_Glyma1    A A S P C S S Y H P S P C A S Y N P S P G S S S F P S P S S S P Y T Q I P - - - - - - N A D G N S L I P W L K N L S T A
pt020395_POPTR_    S A S P C S S Y H R S P C A S Y N P S P A S S S F P S P V S S H Y A A N A N - - - - G N A D P N S L I P W L K N L S S G
Os000898_Os01t0    S P S P C S S Y Q P S P R A S Y N A S P T S S S F P S G A S S P F L P H P N N M A N - G V D G N P I L P W L K T L S N S
Sb024553_Sorbi1    S P S P C S S Y Q V S P R A S Y N A S P T S S S F P S G A S S P F L P - P N E M V N G G I D G N P I L P W L K T F S N G
 
AT4G18890.1     S P S - - - - K L P - - - F F H G N S I S A P V T P P L - - - - A R S P - - - - - - - - - - - - - - - T R D Q - - - - -
gm037328_Glyma1    S S S A S S P K L P - H L Y L H S G S I S A P V T P P L S S P T S R T P R I N V E W D E Q S A R P G W T R Q Q H Y S F -
pt020395_POPTR_    S S S A - S P K H P H H L F I H T G S I S A P V T P P L S S P T A R T P R T K N D W D D A A A G Q S W M - G Q N Y S F M
Os000898_Os01t0    P S S K K H P Q L P - P L L I H G G S I S A P V T P P L S S P T A R T P R M K T D W D E S N V Q P T W T G S N - - - - -
Sb024553_Sorbi1    T P S K K H P L L P - P L L I H G G S I S A P V T P P L S S P S A R T P R M K T D W D E A T I Q P P W H G A N - - - - -
 
AT4G18890.1     - V T I P - - - - - - - - - - - - - D S G W L S G M Q T P Q S G P S S P T F S L V S R N P F - F D K E A F K M G D C N S
gm037328_Glyma1    - - - L P S S S P P S P G R Q V V - D P E W F A G I K L P H V S P T S P T F S L V S S N P F A F K E D G - - L P G S G S
pt020395_POPTR_    P S S M P S S T P P S P G R H V L P D S G W L A G I Q I P Q S G P S S P T F S L V S R N P F G F R E E A - - L S G A G S
Os000898_Os01t0    S P C V V N S T P P S P G R T M L P D P A W L A G I Q I S S T S P S S P T F S L V S S N P F S V F K D A I L V G N N S S
Sb024553_Sorbi1    S P T I V N S T P P S P G R S I A P D P A W L A G I Q I S S T S P N S P T F S L V S T N P F S V F K E S I P V G N S S S
 
AT4G18890.1     P M W T P G Q S G N C S P A I P A G V D Q N S D V P M A D G M T A E F A F G C N A M A - - - A N G M V K P W E G E R I H
gm037328_Glyma1    R M W T P A Q S G T C S P A I P P G S D Q N A D I P M S E A V S D E F A F G S N T L - - - - - - G L V K P W E G E R I H
pt020395_POPTR_    R M W T P G Q S G T C S P A I P A G I D Q T A D V P M S D S M A A E F A F G S N A A - - - - - - G L V K P W E G E R I H
Os000898_Os01t0    R M C T P G Q S G T C S P A I P - G M A P H P D I H M M D A V S D E F A F G S S T N G G H Q A A G L V R A W E G E R I H
Sb024553_Sorbi1    R M C T P G Q S G T C S P A I P - G M L Q H S D V H M M D A V S D E F A F G S S T N G A Q Q A A G L V R A W E G E R I H
 
AT4G18890.1     G E C V S D D L E L T L G N S R T R - - -
gm037328_Glyma1    E E F G S D D L E L T L G N S K T R - - -
pt020395_POPTR_    E E C V S D D L E L T L G N S N T R - - -
Os000898_Os01t0    E D S G S D D L E L T L G S S R T R A A A
Sb024553_Sorbi1    E D S G S D D L E L T L K L - - - - - - -
 
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