fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18890.1 ECVSDDLELTLGNSRT at 272/284 in AT4G18890.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026020 ECGSDDLELTLGNSRT in 308/319 AT1G78700.1 not_not 0.614107883 III
Pt030017 ECGSDDLELTLGNSRT in 317/328 AT1G78700.1 not_not 0.599585062 III
Pt030016 ECGSDDLELTLGNSRT in 317/328 AT1G78700.1 not_not 0.599585062 III
Pt025437 ECVSDDLELTLGNSST in 243/254 AT1G78700.1 not_not 0.429460580 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18890.1     MTSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAG
pt025437_POPTR_ ------------------------------------------------------------
pt030016_POPTR_ MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAG
pt030017_POPTR_ MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAG
pt026020_POPTR_ MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFKLPKHCDNNEVLKALCNEAG
                                                                            

AT4G18890.1     WTVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSPTNPF-
pt025437_POPTR_ -------------------MDIIGGSASASPCSSYHQSPCASYNPSPASSSFPSPVSSRY
pt030016_POPTR_ WTVEPDGTTFRKGCKPVERMDILGVSATTSPCSSYHPSPCASYNPSPGSSSFPSPASSSY
pt030017_POPTR_ WTVEPDGTTFRKGCKPVERMDILGVSATTSPCSSYHPSPCASYNPSPGSSSFPSPASSSY
pt026020_POPTR_ WAVEPDGTTYRKGCKPAEHMDIIGGSATASPCSSYLPSPCASYNPSPGSSSFPSPVSSSY
                                   **::. *:::******  ** *******.*******...  

AT4G18890.1     ---------GDANSLIPWLKNL----SSNSPSKLP--FFHGNSISAPVTPPL----ARS-
pt025437_POPTR_ AANGNGNVDADANSLIPWLRNLSSGSSSASPKHPNHLFIHTGSISAPVTPPLSSPTARTP
pt030016_POPTR_ AANAN----MDCNSLIPWLKNLSSASSSASSSKFPHLYIHGGSISAPVTPPLSSPTARTA
pt030017_POPTR_ AANAN----MDCNSLIPWLKNLSSASSSASSSKFPHLYIHGGSISAPVTPPLSSPTARTA
pt026020_POPTR_ AANAN----LDDNSLLPWLKNL----SSASSSKLPHLYIHGGSISAPVTPPLSSPTARTP
                          * ***:***:**    ** *..:    ::* .**********    **: 

AT4G18890.1     --------------------------------PTRDQVTIPDSGWLSGMQTPQSGPSSPT
pt025437_POPTR_ RTRNDWDDPAAGQSWMGQNYSFLPSSMPSSTPPSPGRQVLPDSGWLAGIQIPQSGPSSPT
pt030016_POPTR_ RIKADWEDQSIRPGWGGQHYSF----LPSSTPPSPGRQIVPDPEWFRGIRIPQGGPTSPT
pt030017_POPTR_ RIKADWEDQSIRPGWGGQHYSF----LPSSTPPSPGRQIVPDPEWFRGIRIPQGGPTSPT
pt026020_POPTR_ RIKTGWEDQPIHPGWCGQHY------LPSSTPPSPGRQIVPDPGWFAGIRLPQGGPTSPT
                                                *: .:  :**. *: *:: **.**:***

AT4G18890.1     FSLVSRNPF-FDKEAFKMGD--CNSPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEF
pt025437_POPTR_ FSLVSRNPFGFKEEALSG----AGSRMWTPGQSGTCSPAVPAGIDQTADVPMADSMAAEF
pt030016_POPTR_ FSLVASNPFGFKEEAFGGGGSNGGSRMWTPGQSGTCSPAIAAGSDHTADIPMAE-ISDEF
pt030017_POPTR_ FSLVASNPFGFKEEAFGGGGSNGGSRMWTPGQSGTCSPAIAAGSDHTADIPMAE-ISDEF
pt026020_POPTR_ FSLVASNPFGFKEEALAG----GGSRMWTPGQSGTCSPAIAAGSDQTADIPMAEVISDEF
                ****: *** *.:**:       .* ********.****:.** *:.:*:***: :: **

AT4G18890.1     AFGCNAMAANGMVKPWEGERIHGECVSDDLELTLGNSRTR
pt025437_POPTR_ AFGSN---TAGLVKPWEGERIHEECVSDDLELTLGNSSTR
pt030016_POPTR_ AFRCN---ATGLVKPWEGERIHEECGSDDLELTLGNSRTR
pt030017_POPTR_ AFRCN---ATGLVKPWEGERIHEECGSDDLELTLGNSRTR
pt026020_POPTR_ AFRCN---ATGLVKPWEGERIHEECGSDDLELTLGNSRTR
                ** .*   : *:********** ** *********** **
BoxShade v3.31 C (beta, 970507) Output
AT4G18890.1     M T S G T R T P T W K E R E N N K R R E R R R R A I A A K I F A G L R I H G N F K L P K H C D N N E V L K A L C N E A G
pt025437_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030016_POPTR_    M T S G T R L P T W K E R E N N K R R E R R R R A I A A K I F S G L R M Y G N Y K L P K H C D N N E V L K A L C N E A G
pt030017_POPTR_    M T S G T R L P T W K E R E N N K R R E R R R R A I A A K I F S G L R M Y G N Y K L P K H C D N N E V L K A L C N E A G
pt026020_POPTR_    M T S G T R L P T W K E R E N N K R R E R R R R A I A A K I F S G L R M Y G N F K L P K H C D N N E V L K A L C N E A G
 
AT4G18890.1     W T V E D D G T T Y R K G C K P M D R M D L M N G S T S A S P C S S Y Q H S P R A S Y N P S P S S S S F P S P T N P F -
pt025437_POPTR_    - - - - - - - - - - - - - - - - - - - M D I I G G S A S A S P C S S Y H Q S P C A S Y N P S P A S S S F P S P V S S R Y
pt030016_POPTR_    W T V E P D G T T F R K G C K P V E R M D I L G V S A T T S P C S S Y H P S P C A S Y N P S P G S S S F P S P A S S S Y
pt030017_POPTR_    W T V E P D G T T F R K G C K P V E R M D I L G V S A T T S P C S S Y H P S P C A S Y N P S P G S S S F P S P A S S S Y
pt026020_POPTR_    W A V E P D G T T Y R K G C K P A E H M D I I G G S A T A S P C S S Y L P S P C A S Y N P S P G S S S F P S P V S S S Y
 
AT4G18890.1     - - - - - - - - - G D A N S L I P W L K N L - - - - S S N S P S K L P - - F F H G N S I S A P V T P P L - - - - A R S -
pt025437_POPTR_    A A N G N G N V D A D A N S L I P W L R N L S S G S S S A S P K H P N H L F I H T G S I S A P V T P P L S S P T A R T P
pt030016_POPTR_    A A N A N - - - - M D C N S L I P W L K N L S S A S S S A S S S K F P H L Y I H G G S I S A P V T P P L S S P T A R T A
pt030017_POPTR_    A A N A N - - - - M D C N S L I P W L K N L S S A S S S A S S S K F P H L Y I H G G S I S A P V T P P L S S P T A R T A
pt026020_POPTR_    A A N A N - - - - L D D N S L L P W L K N L - - - - S S A S S S K L P H L Y I H G G S I S A P V T P P L S S P T A R T P
 
AT4G18890.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P T R D Q V T I P D S G W L S G M Q T P Q S G P S S P T
pt025437_POPTR_    R T R N D W D D P A A G Q S W M G Q N Y S F L P S S M P S S T P P S P G R Q V L P D S G W L A G I Q I P Q S G P S S P T
pt030016_POPTR_    R I K A D W E D Q S I R P G W G G Q H Y S F - - - - L P S S T P P S P G R Q I V P D P E W F R G I R I P Q G G P T S P T
pt030017_POPTR_    R I K A D W E D Q S I R P G W G G Q H Y S F - - - - L P S S T P P S P G R Q I V P D P E W F R G I R I P Q G G P T S P T
pt026020_POPTR_    R I K T G W E D Q P I H P G W C G Q H Y - - - - - - L P S S T P P S P G R Q I V P D P G W F A G I R L P Q G G P T S P T
 
AT4G18890.1     F S L V S R N P F - F D K E A F K M G D - - C N S P M W T P G Q S G N C S P A I P A G V D Q N S D V P M A D G M T A E F
pt025437_POPTR_    F S L V S R N P F G F K E E A L S G - - - - A G S R M W T P G Q S G T C S P A V P A G I D Q T A D V P M A D S M A A E F
pt030016_POPTR_    F S L V A S N P F G F K E E A F G G G G S N G G S R M W T P G Q S G T C S P A I A A G S D H T A D I P M A E - I S D E F
pt030017_POPTR_    F S L V A S N P F G F K E E A F G G G G S N G G S R M W T P G Q S G T C S P A I A A G S D H T A D I P M A E - I S D E F
pt026020_POPTR_    F S L V A S N P F G F K E E A L A G - - - - G G S R M W T P G Q S G T C S P A I A A G S D Q T A D I P M A E V I S D E F
 
AT4G18890.1     A F G C N A M A A N G M V K P W E G E R I H G E C V S D D L E L T L G N S R T R
pt025437_POPTR_    A F G S N - - - T A G L V K P W E G E R I H E E C V S D D L E L T L G N S S T R
pt030016_POPTR_    A F R C N - - - A T G L V K P W E G E R I H E E C G S D D L E L T L G N S R T R
pt030017_POPTR_    A F R C N - - - A T G L V K P W E G E R I H E E C G S D D L E L T L G N S R T R
pt026020_POPTR_    A F R C N - - - A T G L V K P W E G E R I H E E C G S D D L E L T L G N S R T R
 
0