fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18890.1 ECVSDDLELTLGNSRT at 272/284 in AT4G18890.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000898 DSGSDDLELTLGSSRT in 351/365 AT1G78700.1 1st_not 0.504149377 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18890.1     -------------------------MTSGTRTPTWKERENNKRRERRRRAIAAKIFAGLR
Os000898_Os01t0 MATGGGGGGGGMGGGGVGGGAGAAGVGVGGRMPTWRERENNKRRERRRRAIAAKIFAGLR
                                         :  * * ***:************************

AT4G18890.1     IHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSY
Os000898_Os01t0 AHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGYKPPERMEVIGCSVSPSPCSSY
                 **.:*********************.** ******** ** :**:::. *.*.******

AT4G18890.1     QHSPRASYNPSPSSSSFPS-PTNPF----------GDANSLIPWLKNLSSNSPS-----K
Os000898_Os01t0 QPSPRASYNASPTSSSFPSGASSPFLPHPNNMANGVDGNPILPWLKTL-SNSPSSKKHPQ
                * *******.**:****** .:.**           *.*.::****.* *****     :

AT4G18890.1     LP--FFHGNSISAPVTPPL----ARS-----------------------------PTRDQ
Os000898_Os01t0 LPPLLIHGGSISAPVTPPLSSPTARTPRMKTDWDESNVQPTWTGSNSPCVVNSTPPSPGR
                **  ::**.**********    **:                             *: .:

AT4G18890.1     VTIPDSGWLSGMQTPQSGPSSPTFSLVSRNPF--FDKEAFKMGDCNSPMWTPGQSGNCSP
Os000898_Os01t0 TMLPDPAWLAGIQISSTSPSSPTFSLVSSNPFSVF-KDAILVGNNSSRMCTPGQSGTCSP
                . :**..**:*:* ..:.********** ***  * *:*: :*: .* * ******.***

AT4G18890.1     AIPAGVDQNSDVPMADGMTAEFAFGCNAMA---ANGMVKPWEGERIHGECVSDDLELTLG
Os000898_Os01t0 AIP-GMAPHPDIHMMDAVSDEFAFGSSTNGGHQAAGLVRAWEGERIHEDSGSDDLELTLG
                *** *:  :.*: * *.:: *****..: .   * *:*:.******* :. *********

AT4G18890.1     NSRTR---
Os000898_Os01t0 SSRTRAAA
                .****
BoxShade v3.31 C (beta, 970507) Output
AT4G18890.1     - - - - - - - - - - - - - - - - - - - - - - - - - M T S G T R T P T W K E R E N N K R R E R R R R A I A A K I F A G L R
Os000898_Os01t0    M A T G G G G G G G G M G G G G V G G G A G A A G V G V G G R M P T W R E R E N N K R R E R R R R A I A A K I F A G L R
 
AT4G18890.1     I H G N F K L P K H C D N N E V L K A L C N E A G W T V E D D G T T Y R K G C K P M D R M D L M N G S T S A S P C S S Y
Os000898_Os01t0    A H G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G Y K P P E R M E V I G C S V S P S P C S S Y
 
AT4G18890.1     Q H S P R A S Y N P S P S S S S F P S - P T N P F - - - - - - - - - - G D A N S L I P W L K N L S S N S P S - - - - - K
Os000898_Os01t0    Q P S P R A S Y N A S P T S S S F P S G A S S P F L P H P N N M A N G V D G N P I L P W L K T L - S N S P S S K K H P Q
 
AT4G18890.1     L P - - F F H G N S I S A P V T P P L - - - - A R S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P T R D Q
Os000898_Os01t0    L P P L L I H G G S I S A P V T P P L S S P T A R T P R M K T D W D E S N V Q P T W T G S N S P C V V N S T P P S P G R
 
AT4G18890.1     V T I P D S G W L S G M Q T P Q S G P S S P T F S L V S R N P F - - F D K E A F K M G D C N S P M W T P G Q S G N C S P
Os000898_Os01t0    T M L P D P A W L A G I Q I S S T S P S S P T F S L V S S N P F S V F - K D A I L V G N N S S R M C T P G Q S G T C S P
 
AT4G18890.1     A I P A G V D Q N S D V P M A D G M T A E F A F G C N A M A - - - A N G M V K P W E G E R I H G E C V S D D L E L T L G
Os000898_Os01t0    A I P - G M A P H P D I H M M D A V S D E F A F G S S T N G G H Q A A G L V R A W E G E R I H E D S G S D D L E L T L G
 
AT4G18890.1     N S R T R - - -
Os000898_Os01t0    S S R T R A A A
 
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