fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18890.1 ECVSDDLELTLGNSRT at 272/284 in AT4G18890.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os025252 ECASDELELTLGSSKT in 340/355 AT1G78700.1 not_not 0.473029045 III
Os007138 ECGSDDLELTLGSSMT in 337/351 AT1G78700.1 not_not 0.404564315 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18890.1     MTSG------------TRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDN
Os025252_Os06t0 MTNGAGGGGGGGGLGGTRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYNLPKHCDN
Os007138_Os02t0 MMNGGGGG---------RVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYTLPKHCDN
                * .*             *.***:*****:*************:**** :**:.*******

AT4G18890.1     NEVLKALCNEAGWTVEDDGTTYRKGCKP--MDRMDLMNGSTSASPCSSYQHSPRASYNPS
Os025252_Os06t0 NEVLKALCNEAGWTVEPDGTTYRKGCKPPQAERPDPIGRSASPSPCSSYQPSPRASYNPS
Os007138_Os02t0 NEVLKALCNEAGWTVEPDGTTYRKGCKPPASELADQLGRSPSASPCSSYQPSPR------
                **************** ***********   :  * :. *.*.******* ***      

AT4G18890.1     PSSSSFPSPTN------------PFGDANSLIPWLKN--LSSN-------SPSKLP----
Os025252_Os06t0 PASSSFPSSGSSSHITIGGNSLIGGVEGSSLIPWLKTLPLSSS-----YASSSKFPQLHH
Os007138_Os02t0 -GTSSFPSSGSSSQITLGGG---GGGEGSSLIPWLKT--LSSAGVGIGGGSSSKFPA-HY
                 .:*****. .               :..*******.  ***        *.**:*    

AT4G18890.1     -FFHGNSISAPVTPPLARSPTRDQ----------------------------------VT
Os025252_Os06t0 LYFNGGSISAPVTPP-SSSPTRTPRLRT-DWEN------ASVQPPWAS--ANY-----TS
Os007138_Os02t0 SYFGGGSISAPVTPP-SGSPPRTPRLKTAAWEEYHHHHAGSVLPPWATVGASYAYAASSS
                 :* *.********* : **.*                                     :

AT4G18890.1     IP-----------------------DSGWLSGMQTPQSGPSSPTFSLVS--RNPF-FDKE
Os025252_Os06t0 LPNSTPPSPGHKIAP----------DPAWLSGFQISSAGPSSPTYNLVS--PNPFGIFKE
Os007138_Os02t0 LPNSTPPSPRRKVAAAAAAAGGGNDAAAWLAGFQISSAGPSSPTYSLVAPPPNPFGAAAA
                :*                        ..**:*:* ..:******:.**:   ***     

AT4G18890.1     AFKMGDCNSPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNA---MAANGMV
Os025252_Os06t0 AIA---STSRVCTPGQSGTCSP-VMGGMPAHHDVQMVDGAPDDFAFGSSSNGNNESPGLV
Os007138_Os02t0 AAG---SSSRV----MSGACSP-VAGG-----DVQMADAARREFAFGGEG---GKMTGLV
                *     ..* :     ** *** : .*     ** *.*.   :**** ..       *:*

AT4G18890.1     KPWEGERIHGECVSDDLELTLGNSRTR----
Os025252_Os06t0 KAWEGERIHEECASDELELTLGSSKTRADPS
Os007138_Os02t0 KAWEGERIHEECGSDDLELTLGSSMTRGDR-
                *.******* ** **:******.* **
BoxShade v3.31 C (beta, 970507) Output
AT4G18890.1     M T S G - - - - - - - - - - - - T R T P T W K E R E N N K R R E R R R R A I A A K I F A G L R I H G N F K L P K H C D N
Os025252_Os06t0    M T N G A G G G G G G G G L G G T R V P T W R E R E N N R R R E R R R R A I A A K I Y A G L R A Y G N Y N L P K H C D N
Os007138_Os02t0    M M N G G G G G - - - - - - - - - R V P T W R E R E N N R R R E R R R R A I A A K I Y A G L R A Y G N Y T L P K H C D N
 
AT4G18890.1     N E V L K A L C N E A G W T V E D D G T T Y R K G C K P - - M D R M D L M N G S T S A S P C S S Y Q H S P R A S Y N P S
Os025252_Os06t0    N E V L K A L C N E A G W T V E P D G T T Y R K G C K P P Q A E R P D P I G R S A S P S P C S S Y Q P S P R A S Y N P S
Os007138_Os02t0    N E V L K A L C N E A G W T V E P D G T T Y R K G C K P P A S E L A D Q L G R S P S A S P C S S Y Q P S P R - - - - - -
 
AT4G18890.1     P S S S S F P S P T N - - - - - - - - - - - - P F G D A N S L I P W L K N - - L S S N - - - - - - - S P S K L P - - - -
Os025252_Os06t0    P A S S S F P S S G S S S H I T I G G N S L I G G V E G S S L I P W L K T L P L S S S - - - - - Y A S S S K F P Q L H H
Os007138_Os02t0    - G T S S F P S S G S S S Q I T L G G G - - - G G G E G S S L I P W L K T - - L S S A G V G I G G G S S S K F P A - H Y
 
AT4G18890.1     - F F H G N S I S A P V T P P L A R S P T R D Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V T
Os025252_Os06t0    L Y F N G G S I S A P V T P P - S S S P T R T P R L R T - D W E N - - - - - - A S V Q P P W A S - - A N Y - - - - - T S
Os007138_Os02t0    S Y F G G G S I S A P V T P P - S G S P P R T P R L K T A A W E E Y H H H H A G S V L P P W A T V G A S Y A Y A A S S S
 
AT4G18890.1     I P - - - - - - - - - - - - - - - - - - - - - - - D S G W L S G M Q T P Q S G P S S P T F S L V S - - R N P F - F D K E
Os025252_Os06t0    L P N S T P P S P G H K I A P - - - - - - - - - - D P A W L S G F Q I S S A G P S S P T Y N L V S - - P N P F G I F K E
Os007138_Os02t0    L P N S T P P S P R R K V A A A A A A A G G G N D A A A W L A G F Q I S S A G P S S P T Y S L V A P P P N P F G A A A A
 
AT4G18890.1     A F K M G D C N S P M W T P G Q S G N C S P A I P A G V D Q N S D V P M A D G M T A E F A F G C N A - - - M A A N G M V
Os025252_Os06t0    A I A - - - S T S R V C T P G Q S G T C S P - V M G G M P A H H D V Q M V D G A P D D F A F G S S S N G N N E S P G L V
Os007138_Os02t0    A A G - - - S S S R V - - - - M S G A C S P - V A G G - - - - - D V Q M A D A A R R E F A F G G E G - - - G K M T G L V
 
AT4G18890.1     K P W E G E R I H G E C V S D D L E L T L G N S R T R - - - -
Os025252_Os06t0    K A W E G E R I H E E C A S D E L E L T L G S S K T R A D P S
Os007138_Os02t0    K A W E G E R I H E E C G S D D L E L T L G S S M T R G D R -
 
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