fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18890.1 ECVSDDLELTLGNSRT at 272/284 in AT4G18890.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000898 DSGSDDLELTLGSSRT in 351/365 AT1G78700.1 1st_not 0.504149377 II
Os025252 ECASDELELTLGSSKT in 340/355 AT1G78700.1 not_not 0.473029045 III
Os007138 ECGSDDLELTLGSSMT in 337/351 AT1G78700.1 not_not 0.404564315 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18890.1     MTSG-------------------------TRTPTWKERENNKRRERRRRAIAAKIFAGLR
Os000898_Os01t0 MATGGGGGGGGMGGGGVGGGAGAAGVGVGGRMPTWRERENNKRRERRRRAIAAKIFAGLR
Os007138_Os02t0 MMNGGGGG----------------------RVPTWRERENNRRRERRRRAIAAKIYAGLR
Os025252_Os06t0 MTNGAGGGG---GGGGLG----------GTRVPTWRERENNRRRERRRRAIAAKIYAGLR
                * .*                          * ***:*****:*************:****

AT4G18890.1     IHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPM--DRMDLMNGSTSASPCS
Os000898_Os01t0 AHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGYKPP--ERMEVIGCSVSPSPCS
Os007138_Os02t0 AYGNYTLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPASELADQLGRSPSASPCS
Os025252_Os06t0 AYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPQAERPDPIGRSASPSPCS
                 :*.:.********************.** ******** **   :  : :. * *.****

AT4G18890.1     SYQHSPRASYNPSPSSSSFP-----SPTNPFGD-------ANSLIPWLKNL---SSN---
Os000898_Os01t0 SYQPSPRASYNASPTSSSFP-SGASSPFLPHPNNMANGVDGNPILPWLKTL---SNS---
Os007138_Os02t0 SYQPSPRG-------TSSFPSSGSSSQITLGGG---GGGEGSSLIPWLKTL---SSAGVG
Os025252_Os06t0 SYQPSPRASYNPSPASSSFPSSGSSSHITIGGNSLIGGVEGSSLIPWLKTLPLSSSY---
                *** ***.       :****     *      .       ...::****.*   *.    

AT4G18890.1     ----SPSKLP-----FFHGNSISAPVTPPLA----RSP---T------------------
Os000898_Os01t0 ---PSSKKHPQLPPLLIHGGSISAPVTPPLSSPTARTPRMKT-DWDE------SNVQPTW
Os007138_Os02t0 IGGGSSSKFPA-HYSYFGGGSISAPVTPPSGSPP-RTPRLKTAAWEEYHHHHAGSVLPPW
Os025252_Os06t0 ---ASSSKFPQLHHLYFNGGSISAPVTPPSSSPT-RTPRLRT-DWEN------ASVQPPW
                    *..* *      : *.********* .    *:*   *                  

AT4G18890.1     ---------RDQVTIP-----------------------DSGWLSGMQTPQSGPSSPTFS
Os000898_Os01t0 TG-------SNSPCVVNSTPPSPGRTMLP----------DPAWLAGIQISSTSPSSPTFS
Os007138_Os02t0 ATVGASYAYAASSSLPNSTPPSPRRKVAAAAAAAGGGNDAAAWLAGFQISSAGPSSPTYS
Os025252_Os06t0 AS-------ANYTSLPNSTPPSPGHKIAP----------DPAWLSGFQISSAGPSSPTYN
                              :                         ..**:*:* ..:.*****:.

AT4G18890.1     LVS--RNPF-FDKEAFKMGDCNSPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAF
Os000898_Os01t0 LVS--SNPFSVFKDAILVGNNSSRMCTPGQSGTCSPAIP-GMAPHPDIHMMDAVSDEFAF
Os007138_Os02t0 LVAPPPNPFGAAAAAAG---SSSRV----MSGACSPVAG-G-----DVQMADAARREFAF
Os025252_Os06t0 LVS--PNPFGIFKEAIA---STSRVCTPGQSGTCSPVMG-GMPAHHDVQMVDGAPDDFAF
                **:   ***     *      .* :     ** ***.   *     *: * *.   :***

AT4G18890.1     GCN---AMAANGMVKPWEGERIHGECVSDDLELTLGNSRTR----
Os000898_Os01t0 GSSTNGGHQAAGLVRAWEGERIHEDSGSDDLELTLGSSRTRAAA-
Os007138_Os02t0 GGE---GGKMTGLVKAWEGERIHEECGSDDLELTLGSSMTRGDR-
Os025252_Os06t0 GSSSNGNNESPGLVKAWEGERIHEECASDELELTLGSSKTRADPS
                * .        *:*:.******* :. **:******.* **
BoxShade v3.31 C (beta, 970507) Output
AT4G18890.1     M T S G - - - - - - - - - - - - - - - - - - - - - - - - - T R T P T W K E R E N N K R R E R R R R A I A A K I F A G L R
Os000898_Os01t0    M A T G G G G G G G G M G G G G V G G G A G A A G V G V G G R M P T W R E R E N N K R R E R R R R A I A A K I F A G L R
Os007138_Os02t0    M M N G G G G G - - - - - - - - - - - - - - - - - - - - - - R V P T W R E R E N N R R R E R R R R A I A A K I Y A G L R
Os025252_Os06t0    M T N G A G G G G - - - G G G G L G - - - - - - - - - - G T R V P T W R E R E N N R R R E R R R R A I A A K I Y A G L R
 
AT4G18890.1     I H G N F K L P K H C D N N E V L K A L C N E A G W T V E D D G T T Y R K G C K P M - - D R M D L M N G S T S A S P C S
Os000898_Os01t0    A H G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G Y K P P - - E R M E V I G C S V S P S P C S
Os007138_Os02t0    A Y G N Y T L P K H C D N N E V L K A L C N E A G W T V E P D G T T Y R K G C K P P A S E L A D Q L G R S P S A S P C S
Os025252_Os06t0    A Y G N Y N L P K H C D N N E V L K A L C N E A G W T V E P D G T T Y R K G C K P P Q A E R P D P I G R S A S P S P C S
 
AT4G18890.1     S Y Q H S P R A S Y N P S P S S S S F P - - - - - S P T N P F G D - - - - - - - A N S L I P W L K N L - - - S S N - - -
Os000898_Os01t0    S Y Q P S P R A S Y N A S P T S S S F P - S G A S S P F L P H P N N M A N G V D G N P I L P W L K T L - - - S N S - - -
Os007138_Os02t0    S Y Q P S P R G - - - - - - - T S S F P S S G S S S Q I T L G G G - - - G G G E G S S L I P W L K T L - - - S S A G V G
Os025252_Os06t0    S Y Q P S P R A S Y N P S P A S S S F P S S G S S S H I T I G G N S L I G G V E G S S L I P W L K T L P L S S S Y - - -
 
AT4G18890.1     - - - - S P S K L P - - - - - F F H G N S I S A P V T P P L A - - - - R S P - - - T - - - - - - - - - - - - - - - - - -
Os000898_Os01t0    - - - P S S K K H P Q L P P L L I H G G S I S A P V T P P L S S P T A R T P R M K T - D W D E - - - - - - S N V Q P T W
Os007138_Os02t0    I G G G S S S K F P A - H Y S Y F G G G S I S A P V T P P S G S P P - R T P R L K T A A W E E Y H H H H A G S V L P P W
Os025252_Os06t0    - - - A S S S K F P Q L H H L Y F N G G S I S A P V T P P S S S P T - R T P R L R T - D W E N - - - - - - A S V Q P P W
 
AT4G18890.1     - - - - - - - - - R D Q V T I P - - - - - - - - - - - - - - - - - - - - - - - D S G W L S G M Q T P Q S G P S S P T F S
Os000898_Os01t0    T G - - - - - - - S N S P C V V N S T P P S P G R T M L P - - - - - - - - - - D P A W L A G I Q I S S T S P S S P T F S
Os007138_Os02t0    A T V G A S Y A Y A A S S S L P N S T P P S P R R K V A A A A A A A G G G N D A A A W L A G F Q I S S A G P S S P T Y S
Os025252_Os06t0    A S - - - - - - - A N Y T S L P N S T P P S P G H K I A P - - - - - - - - - - D P A W L S G F Q I S S A G P S S P T Y N
 
AT4G18890.1     L V S - - R N P F - F D K E A F K M G D C N S P M W T P G Q S G N C S P A I P A G V D Q N S D V P M A D G M T A E F A F
Os000898_Os01t0    L V S - - S N P F S V F K D A I L V G N N S S R M C T P G Q S G T C S P A I P - G M A P H P D I H M M D A V S D E F A F
Os007138_Os02t0    L V A P P P N P F G A A A A A A G - - - S S S R V - - - - M S G A C S P V A G - G - - - - - D V Q M A D A A R R E F A F
Os025252_Os06t0    L V S - - P N P F G I F K E A I A - - - S T S R V C T P G Q S G T C S P V M G - G M P A H H D V Q M V D G A P D D F A F
 
AT4G18890.1     G C N - - - A M A A N G M V K P W E G E R I H G E C V S D D L E L T L G N S R T R - - - -
Os000898_Os01t0    G S S T N G G H Q A A G L V R A W E G E R I H E D S G S D D L E L T L G S S R T R A A A -
Os007138_Os02t0    G G E - - - G G K M T G L V K A W E G E R I H E E C G S D D L E L T L G S S M T R G D R -
Os025252_Os06t0    G S S S N G N N E S P G L V K A W E G E R I H E E C A S D E L E L T L G S S K T R A D P S
 
0