fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18890.1 ECVSDDLELTLGNSRT at 272/284 in AT4G18890.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033896 not found in 589aa AT1G78700.1 not_not 0.475103734 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18890.1     ------------------------------------------------------------
Sb033896_Sorbi1 RLAAAAVTAEQRRLRSDYHYQFLLLRRFLPLLLLCSAPSPPPKFHTSNNKQIKASKGEQG
                                                                            

AT4G18890.1     -----------------------MTS----------GTRTPTWKERENNKRRERRRRAIA
Sb033896_Sorbi1 TAGVCVCAAPAGQIREIRRSGAPMTSGAGGAAAGIGGTRVPTWRERENNRRRERRRRAIA
                                       ***          ***.***:*****:**********

AT4G18890.1     AKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPM--DRMDLMNG
Sb033896_Sorbi1 AKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLATERPDPIGR
                ******** :**::*********************** ***********:  :* * :. 

AT4G18890.1     STSASPCSSYQHSPRASYNPSPSSSSFPSP----------TNPFG--DANSLIPWLKNLS
Sb033896_Sorbi1 SASPSPCSSYQPSPRASYNPSPASSSFPSSGSSSHITLGGNNFMGGVEGNSLIPWLKNLS
                *:*.******* **********:******.          .* :*  :.***********

AT4G18890.1     SN----SPSKLP-----FFHGNSISAPVTPPLARSPTRD---------------------
Sb033896_Sorbi1 SSSSFASSSKFPQLHHLYFNGGSISAPVTPP-SSSPTRTPRIKTDWENPSVQPPWAGANY
                *.    *.**:*     :*:*.********* : ****                      

AT4G18890.1     --------------QVTIPDSGWLSGMQTPQSGPSSPTFSLVSRNPF-FDKEAFKMGDCN
Sb033896_Sorbi1 ASLPNSQPPSPGHHQVA-PDPAWLAGFQISSAGPSSPTYSLVAPNPFGIFKETIA---ST
                              **: **..**:*:* ..:******:***: *** : **::    ..

AT4G18890.1     SPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMAAN---GMVKPWEGERI
Sb033896_Sorbi1 SRMCTPGQSGTCSPVM-GGVPIHHDVQMVDGAPDDFAFGSSSNGNNESPGLVKAWEGERI
                * * ******.***.: .**  : ** *.** . :****..: . *   *:**.******

AT4G18890.1     HGECVSD--DLELTLGNSRTR----
Sb033896_Sorbi1 HEECASDEHELELTLGSSKTRADPS
                * **.**  :******.*:**
BoxShade v3.31 C (beta, 970507) Output
AT4G18890.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033896_Sorbi1    R L A A A A V T A E Q R R L R S D Y H Y Q F L L L R R F L P L L L L C S A P S P P P K F H T S N N K Q I K A S K G E Q G
 
AT4G18890.1     - - - - - - - - - - - - - - - - - - - - - - - M T S - - - - - - - - - - G T R T P T W K E R E N N K R R E R R R R A I A
Sb033896_Sorbi1    T A G V C V C A A P A G Q I R E I R R S G A P M T S G A G G A A A G I G G T R V P T W R E R E N N R R R E R R R R A I A
 
AT4G18890.1     A K I F A G L R I H G N F K L P K H C D N N E V L K A L C N E A G W T V E D D G T T Y R K G C K P M - - D R M D L M N G
Sb033896_Sorbi1    A K I F A G L R A Y G N Y N L P K H C D N N E V L K A L C N E A G W T V E P D G T T Y R K G C K P L A T E R P D P I G R
 
AT4G18890.1     S T S A S P C S S Y Q H S P R A S Y N P S P S S S S F P S P - - - - - - - - - - T N P F G - - D A N S L I P W L K N L S
Sb033896_Sorbi1    S A S P S P C S S Y Q P S P R A S Y N P S P A S S S F P S S G S S S H I T L G G N N F M G G V E G N S L I P W L K N L S
 
AT4G18890.1     S N - - - - S P S K L P - - - - - F F H G N S I S A P V T P P L A R S P T R D - - - - - - - - - - - - - - - - - - - - -
Sb033896_Sorbi1    S S S S F A S S S K F P Q L H H L Y F N G G S I S A P V T P P - S S S P T R T P R I K T D W E N P S V Q P P W A G A N Y
 
AT4G18890.1     - - - - - - - - - - - - - - Q V T I P D S G W L S G M Q T P Q S G P S S P T F S L V S R N P F - F D K E A F K M G D C N
Sb033896_Sorbi1    A S L P N S Q P P S P G H H Q V A - P D P A W L A G F Q I S S A G P S S P T Y S L V A P N P F G I F K E T I A - - - S T
 
AT4G18890.1     S P M W T P G Q S G N C S P A I P A G V D Q N S D V P M A D G M T A E F A F G C N A M A A N - - - G M V K P W E G E R I
Sb033896_Sorbi1    S R M C T P G Q S G T C S P V M - G G V P I H H D V Q M V D G A P D D F A F G S S S N G N N E S P G L V K A W E G E R I
 
AT4G18890.1     H G E C V S D - - D L E L T L G N S R T R - - - -
Sb033896_Sorbi1    H E E C A S D E H E L E L T L G S S K T R A D P S
 
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