fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18890.1 ECVSDDLELTLGNSRT at 272/284 in AT4G18890.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024553 not found in 526aa AT1G78700.1 1st_not 0.504149377 II
Sb033896 not found in 589aa AT1G78700.1 not_not 0.475103734 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18890.1     ------------------------------------------------------------
Sb033896_Sorbi1 RLAAAAVTAEQRRLRSDYHYQFLLLRRFLPLLLLCSAPSPPPKFHTSNNKQIKASKGEQG
Sb024553_Sorbi1 ------------------------------------------------------------
                                                                            

AT4G18890.1     -----------------------MTSGT----------------RTPTWKERENNKRRER
Sb033896_Sorbi1 TAGVCVCAAPAGQIREIRRSGAPMTSGAGG------AAAGIGGTRVPTWRERENNRRRER
Sb024553_Sorbi1 -AGA--------------RAGRDMASGGGGGAGGGLGAAGAGG-RMPTWRERENNKRRER
                                       *:**                 * ***:*****:****

AT4G18890.1     RRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPM--DR
Sb033896_Sorbi1 RRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLATER
Sb024553_Sorbi1 RRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGSKPM--ER
                ************** :*.::********************.** ********.**:  :*

AT4G18890.1     MDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSP-TNPF----------G--DANSLI
Sb033896_Sorbi1 PDPIGRSASPSPCSSYQPSPRASYNPSPASSSFPSSGSSSHITLGGNNFM-GGVEGNSLI
Sb024553_Sorbi1 MDHIGCSVSPSPCSSYQVSPRASYNASPTSSSFPSGASSPF--LPPNEMVNGGIDGNPIL
                 * :. *.*.******* *******.**:******  :...          *  :.*.::

AT4G18890.1     PWLKNLSSNS---PS-KLP-----FFHGNSISAPVTPPLARSPT-R--------DQVTI-
Sb033896_Sorbi1 PWLKNLSSSSSFASSSKFPQLHHLYFNGGSISAPVTPPSS-SPT-RTPRIKTDWENPSVQ
Sb024553_Sorbi1 PWLKTFSNGT---PSKKHPLLPPLLIHGGSISAPVTPPLS-SPSARTPRMKTDWDEATIQ
                ****.:*..:   .* * *      ::*.********* : **: *        :: :: 

AT4G18890.1     -------------------------PDSGWLSGMQTPQSGPSSPTFSLVSRNPF-FDKEA
Sb033896_Sorbi1 PPWAGANYASLPNSQPPSPGHHQVAPDPAWLAGFQISSAGPSSPTYSLVAPNPFGIFKET
Sb024553_Sorbi1 PPWHGANSPTIVNSTPPSPG-RSIAPDPAWLAGIQISSTSPNSPTFSLVSTNPFSVFKES
                                         **..**:*:* ..:.*.***:***: *** . **:

AT4G18890.1     FKMGDCNSPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMAAN---GMVK
Sb033896_Sorbi1 IA---STSRMCTPGQSGTCSPVMG-GVPIHHDVQMVDGAPDDFAFGSSSNGNNESPGLVK
Sb024553_Sorbi1 IPVGNSSSRMCTPGQSGTCSPAIP-GMLQHSDVHMMDAVSDEFAFGSSTNGAQQAAGLVR
                :    ..* * ******.***.:  *:  : ** * *. . :****..: . :   *:*:

AT4G18890.1     PWEGERIHGECVSDD--LELTLGNSRTR----
Sb033896_Sorbi1 AWEGERIHEECASDEHELELTLGSSKTRADPS
Sb024553_Sorbi1 AWEGERIHEDSGSDDLELTLKL----------
                .******* :. **:  * *.*
BoxShade v3.31 C (beta, 970507) Output
AT4G18890.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033896_Sorbi1    R L A A A A V T A E Q R R L R S D Y H Y Q F L L L R R F L P L L L L C S A P S P P P K F H T S N N K Q I K A S K G E Q G
Sb024553_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G18890.1     - - - - - - - - - - - - - - - - - - - - - - - M T S G T - - - - - - - - - - - - - - - - R T P T W K E R E N N K R R E R
Sb033896_Sorbi1    T A G V C V C A A P A G Q I R E I R R S G A P M T S G A G G - - - - - - A A A G I G G T R V P T W R E R E N N R R R E R
Sb024553_Sorbi1    - A G A - - - - - - - - - - - - - - R A G R D M A S G G G G G A G G G L G A A G A G G - R M P T W R E R E N N K R R E R
 
AT4G18890.1     R R R A I A A K I F A G L R I H G N F K L P K H C D N N E V L K A L C N E A G W T V E D D G T T Y R K G C K P M - - D R
Sb033896_Sorbi1    R R R A I A A K I F A G L R A Y G N Y N L P K H C D N N E V L K A L C N E A G W T V E P D G T T Y R K G C K P L A T E R
Sb024553_Sorbi1    R R R A I A A K I F A G L R A H G G Y K L P K H C D N N E V L K A L C N E A G W V V E P D G T T Y R K G S K P M - - E R
 
AT4G18890.1     M D L M N G S T S A S P C S S Y Q H S P R A S Y N P S P S S S S F P S P - T N P F - - - - - - - - - - G - - D A N S L I
Sb033896_Sorbi1    P D P I G R S A S P S P C S S Y Q P S P R A S Y N P S P A S S S F P S S G S S S H I T L G G N N F M - G G V E G N S L I
Sb024553_Sorbi1    M D H I G C S V S P S P C S S Y Q V S P R A S Y N A S P T S S S F P S G A S S P F - - L P P N E M V N G G I D G N P I L
 
AT4G18890.1     P W L K N L S S N S - - - P S - K L P - - - - - F F H G N S I S A P V T P P L A R S P T - R - - - - - - - - D Q V T I -
Sb033896_Sorbi1    P W L K N L S S S S S F A S S S K F P Q L H H L Y F N G G S I S A P V T P P S S - S P T - R T P R I K T D W E N P S V Q
Sb024553_Sorbi1    P W L K T F S N G T - - - P S K K H P L L P P L L I H G G S I S A P V T P P L S - S P S A R T P R M K T D W D E A T I Q
 
AT4G18890.1     - - - - - - - - - - - - - - - - - - - - - - - - - P D S G W L S G M Q T P Q S G P S S P T F S L V S R N P F - F D K E A
Sb033896_Sorbi1    P P W A G A N Y A S L P N S Q P P S P G H H Q V A P D P A W L A G F Q I S S A G P S S P T Y S L V A P N P F G I F K E T
Sb024553_Sorbi1    P P W H G A N S P T I V N S T P P S P G - R S I A P D P A W L A G I Q I S S T S P N S P T F S L V S T N P F S V F K E S
 
AT4G18890.1     F K M G D C N S P M W T P G Q S G N C S P A I P A G V D Q N S D V P M A D G M T A E F A F G C N A M A A N - - - G M V K
Sb033896_Sorbi1    I A - - - S T S R M C T P G Q S G T C S P V M G - G V P I H H D V Q M V D G A P D D F A F G S S S N G N N E S P G L V K
Sb024553_Sorbi1    I P V G N S S S R M C T P G Q S G T C S P A I P - G M L Q H S D V H M M D A V S D E F A F G S S T N G A Q Q A A G L V R
 
AT4G18890.1     P W E G E R I H G E C V S D D - - L E L T L G N S R T R - - - -
Sb033896_Sorbi1    A W E G E R I H E E C A S D E H E L E L T L G S S K T R A D P S
Sb024553_Sorbi1    A W E G E R I H E D S G S D D L E L T L K L - - - - - - - - - -
 
0