fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18890.1 ECVSDDLELTLGNSRT at 272/284 in AT4G18890.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037328 EFGSDDLELTLGNSKT in 314/325 AT1G78700.1 1st_not 0.578838174 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18890.1     MTSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAG
gm037328_Glyma1 MTSGTRLPTSKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAG
                ****** ** *************************::***********************

AT4G18890.1     WTVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSPTN---
gm037328_Glyma1 WTVEPDGTTYRKGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPY
                **** ***********::***::.**::*******: ** *******.*******:.   

AT4G18890.1     ---PFGDANSLIPWLKNLSSNSPS----KLP--FFHGNSISAPVTPPL----ARSP----
gm037328_Glyma1 TQIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTSRTPRINV
                   * .*.***********: *.*    ***  ::*..**********    :*:*    

AT4G18890.1     -----------TRDQ--------------VTIPDSGWLSGMQTPQSGPSSPTFSLVSRNP
gm037328_Glyma1 EWDEQSARPGWTRQQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVSPTSPTFSLVSSNP
                           **:*                : *. *::*:: *: .*:******** **

AT4G18890.1     FFDKEAFK---MGDCNSPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMA
gm037328_Glyma1 F----AFKEDGLPGSGSRMWTPAQSGTCSPAIPPGSDQNADIPMSEAVSDEFAFGSNTL-
                *    ***   : ...* ****.***.******.* ***:*:**::.:: *****.*:: 

AT4G18890.1     ANGMVKPWEGERIHGECVSDDLELTLGNSRTR
gm037328_Glyma1 --GLVKPWEGERIHEEFGSDDLELTLGNSKTR
                  *:********** *  ***********:**
BoxShade v3.31 C (beta, 970507) Output
AT4G18890.1     M T S G T R T P T W K E R E N N K R R E R R R R A I A A K I F A G L R I H G N F K L P K H C D N N E V L K A L C N E A G
gm037328_Glyma1    M T S G T R L P T S K E R E N N K R R E R R R R A I A A K I F A G L R M Y G N F K L P K H C D N N E V L K A L C N E A G
 
AT4G18890.1     W T V E D D G T T Y R K G C K P M D R M D L M N G S T S A S P C S S Y Q H S P R A S Y N P S P S S S S F P S P T N - - -
gm037328_Glyma1    W T V E P D G T T Y R K G C K P L E R M D I V G G S S A A S P C S S Y H P S P C A S Y N P S P G S S S F P S P S S S P Y
 
AT4G18890.1     - - - P F G D A N S L I P W L K N L S S N S P S - - - - K L P - - F F H G N S I S A P V T P P L - - - - A R S P - - - -
gm037328_Glyma1    T Q I P N A D G N S L I P W L K N L S T A S S S A S S P K L P H L Y L H S G S I S A P V T P P L S S P T S R T P R I N V
 
AT4G18890.1     - - - - - - - - - - - T R D Q - - - - - - - - - - - - - - V T I P D S G W L S G M Q T P Q S G P S S P T F S L V S R N P
gm037328_Glyma1    E W D E Q S A R P G W T R Q Q H Y S F L P S S S P P S P G R Q V V D P E W F A G I K L P H V S P T S P T F S L V S S N P
 
AT4G18890.1     F F D K E A F K - - - M G D C N S P M W T P G Q S G N C S P A I P A G V D Q N S D V P M A D G M T A E F A F G C N A M A
gm037328_Glyma1    F - - - - A F K E D G L P G S G S R M W T P A Q S G T C S P A I P P G S D Q N A D I P M S E A V S D E F A F G S N T L -
 
AT4G18890.1     A N G M V K P W E G E R I H G E C V S D D L E L T L G N S R T R
gm037328_Glyma1    - - G L V K P W E G E R I H E E F G S D D L E L T L G N S K T R
 
0