fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009126 not found in 277aa AT4G18960.1 not_1st 0.512931034 II
Gm036857 not found in 241aa AT4G18960.1 not_1st 0.676724137 II
Gm021044 not found in 243aa AT4G18960.1 not_1st 0.599137931 II
Pt025767 not found in 238aa AT4G18960.1 not_1st 0.681034482 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18960.1     TAYQSELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
gm021044_Glyma0 MAFPNQSMSSESPQRKMGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVA
gm036857_Glyma1 --------MSVSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
pt025767_POPTR_ MAYQNEP-QESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
Sb009126_Sorbi1 ----------------MGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSILCDAEIA
                                 ****:*********.********************:*****:*

AT4G18960.1     LIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTG-SVAEINA-QYYQQESAKLRQQII
gm021044_Glyma0 LIVFSNRGRLYEYANNSVKASIERYKKASSDSSSGGRSASEANA-QFYQQEAAKLRVQIS
gm036857_Glyma1 LIVFSSRGRLYEYANNSVKATIERYKKASSDSSGAG-SASEANA-QFYQQEADKLRQQIS
pt025767_POPTR_ LIVFSSRGRLYEYSNNSVKSTIERYKKACADSSNNG-SVSEANA-QFYQQEAAKLRSQIG
Sb009126_Sorbi1 LVIFSSRGRLYEYSSNSVRSTIERYKKASASTSGTA-PVIDVNSLQFFQQETAKLRQQIQ
                *::**.*******:.***:.:******* :..*. . .. : *: *::***: *** ** 

AT4G18960.1     SIQNSN-----RQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKRE
gm021044_Glyma0 NLQNHN-----RQMMGEGLSTMNGKDLKNLETKLEKGISRIRSKKNEMLFAEIEHMKKRE
gm036857_Glyma1 NLQNNNRQLNCRQMMGDSLGSLTAKDLKNLETKLEKGISRIRSKKNELLFAEIEYMQKRE
pt025767_POPTR_ NLQNSN-----RNMLGESLSALSVKELKSLEIKLEKGIGRIRSKKNELLFAEIEYMQKRE
Sb009126_Sorbi1 TLQNSN-----RHLMGESIGNMTAKELKGLENRLERGIGRIRSKKNELLLAEIEYMQKRE
                .:** *     *:::*: :. :. *:*:.** :**:.* ********:*::**::*:***

AT4G18960.1     VDLHNDNQILRAKIAENER--------NNPSISLMP---GGSNYEQLMPPPQTQSQPFDS
gm021044_Glyma0 IYLHNDNQLLRAKIGEGER--------SHHNVNGLS---GTTSYESM----QS---QFDS
gm036857_Glyma1 IDLHNNNQLLRAKIAESER--------NHHNMAVLP---GGSNYDSM----QSSQQQFDS
pt025767_POPTR_ IDLHNNNQLLRAKIAENER--------KRQHMNLMP---GGVNFEIM----QS--QPFDS
Sb009126_Sorbi1 ADLHNENMFLRAKVAEVERALQQEAAAEDQTMAMGPAAVGGATTEL-----KALPASFDP
                  ***:* :****:.* **        .   :   .   *  . :      ::    **.

AT4G18960.1     RNYFQVAALQP----------NNHHYSSA----GRQD-----QTALQLV-----------
gm021044_Glyma0 RGFFQVTGLQPN---------NNNQYA-------GQD------MSLQFV-----------
gm036857_Glyma1 RGYFQVTGLQP-----------NNQYA-------RQD-----QMSLQLV-----------
pt025767_POPTR_ RNYSQVNGLPP-----------ANHYP-------HED-----QLFS--------------
Sb009126_Sorbi1 RGYGYYQQQQQQHVLAAASAASSSQYSEQPQGQGQQEYEYHHQTALHLGYHVKIHSAAGG
                *.:                     :*.        ::                       

AT4G18960.1     ----
gm021044_Glyma0 ----
gm036857_Glyma1 ----
pt025767_POPTR_ ----
Sb009126_Sorbi1 KGFL
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     T A Y Q S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
gm021044_Glyma0    M A F P N Q S M S S E S P Q R K M G R G K I E I K R I E N T T S R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
gm036857_Glyma1    - - - - - - - - M S V S P Q R K M G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
pt025767_POPTR_    M A Y Q N E P - Q E S S P L R K L G R G K V E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
Sb009126_Sorbi1    - - - - - - - - - - - - - - - - M G R G K I E I K R I E N T T S R Q V T F C K R R N G L L K K A Y E L S I L C D A E I A
 
AT4G18960.1     L I V F S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N T G - S V A E I N A - Q Y Y Q Q E S A K L R Q Q I I
gm021044_Glyma0    L I V F S N R G R L Y E Y A N N S V K A S I E R Y K K A S S D S S S G G R S A S E A N A - Q F Y Q Q E A A K L R V Q I S
gm036857_Glyma1    L I V F S S R G R L Y E Y A N N S V K A T I E R Y K K A S S D S S G A G - S A S E A N A - Q F Y Q Q E A D K L R Q Q I S
pt025767_POPTR_    L I V F S S R G R L Y E Y S N N S V K S T I E R Y K K A C A D S S N N G - S V S E A N A - Q F Y Q Q E A A K L R S Q I G
Sb009126_Sorbi1    L V I F S S R G R L Y E Y S S N S V R S T I E R Y K K A S A S T S G T A - P V I D V N S L Q F F Q Q E T A K L R Q Q I Q
 
AT4G18960.1     S I Q N S N - - - - - R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E
gm021044_Glyma0    N L Q N H N - - - - - R Q M M G E G L S T M N G K D L K N L E T K L E K G I S R I R S K K N E M L F A E I E H M K K R E
gm036857_Glyma1    N L Q N N N R Q L N C R Q M M G D S L G S L T A K D L K N L E T K L E K G I S R I R S K K N E L L F A E I E Y M Q K R E
pt025767_POPTR_    N L Q N S N - - - - - R N M L G E S L S A L S V K E L K S L E I K L E K G I G R I R S K K N E L L F A E I E Y M Q K R E
Sb009126_Sorbi1    T L Q N S N - - - - - R H L M G E S I G N M T A K E L K G L E N R L E R G I G R I R S K K N E L L L A E I E Y M Q K R E
 
AT4G18960.1     V D L H N D N Q I L R A K I A E N E R - - - - - - - - N N P S I S L M P - - - G G S N Y E Q L M P P P Q T Q S Q P F D S
gm021044_Glyma0    I Y L H N D N Q L L R A K I G E G E R - - - - - - - - S H H N V N G L S - - - G T T S Y E S M - - - - Q S - - - Q F D S
gm036857_Glyma1    I D L H N N N Q L L R A K I A E S E R - - - - - - - - N H H N M A V L P - - - G G S N Y D S M - - - - Q S S Q Q Q F D S
pt025767_POPTR_    I D L H N N N Q L L R A K I A E N E R - - - - - - - - K R Q H M N L M P - - - G G V N F E I M - - - - Q S - - Q P F D S
Sb009126_Sorbi1    A D L H N E N M F L R A K V A E V E R A L Q Q E A A A E D Q T M A M G P A A V G G A T T E L - - - - - K A L P A S F D P
 
AT4G18960.1     R N Y F Q V A A L Q P - - - - - - - - - - N N H H Y S S A - - - - G R Q D - - - - - Q T A L Q L V - - - - - - - - - - -
gm021044_Glyma0    R G F F Q V T G L Q P N - - - - - - - - - N N N Q Y A - - - - - - - G Q D - - - - - - M S L Q F V - - - - - - - - - - -
gm036857_Glyma1    R G Y F Q V T G L Q P - - - - - - - - - - - N N Q Y A - - - - - - - R Q D - - - - - Q M S L Q L V - - - - - - - - - - -
pt025767_POPTR_    R N Y S Q V N G L P P - - - - - - - - - - - A N H Y P - - - - - - - H E D - - - - - Q L F S - - - - - - - - - - - - - -
Sb009126_Sorbi1    R G Y G Y Y Q Q Q Q Q Q H V L A A A S A A S S S Q Y S E Q P Q G Q G Q Q E Y E Y H H Q T A L H L G Y H V K I H S A A G G
 
AT4G18960.1     - - - -
gm021044_Glyma0    - - - -
gm036857_Glyma1    - - - -
pt025767_POPTR_    - - - -
Sb009126_Sorbi1    K G F L
 
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