fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm014266 QSLEQQLELGLNRIRS in 131/205 AT4G18960.1 1st_1st 0.325431034 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18960.1     TAYQSELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
Sm014266_Selmo1 ----------------VGRGKIEIKRIENATSRQVTFSKRRGGLLKKAHELSVLCDAQVA
                                 ************:*.*****.***.******:********:**

AT4G18960.1     LIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEI--NAQYYQQESAKLRQQII
Sm014266_Selmo1 LIIFSSTGKLFEYASTSMKEILDRYGK-YPESVQGGNIASQHHDSDYFSREVIRLKQQLE
                **:*** *:*:**:..*:*  ::** *  .:. : *.:*.   :::*:.:*  :*:**: 

AT4G18960.1     SIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHN
Sm014266_Selmo1 RSQQTQRHLLGDDLAHLALKDLQSLEQQLELGLNRIRSRKEQVFLDEIEDLRRRELQLHK
                  *:::*:*:*: :. :: *:*:.** :** .:.****:*:::::.**: :::**::**:

AT4G18960.1     DNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHY
Sm014266_Selmo1 ENEMLRRRV------------MQCPSNF---VNPLETREPP-----SFGNASLS------
                :*::** ::            *   **:   : * :*:. *      *  *:*.      

AT4G18960.1     SSAGRQDQTALQLV
Sm014266_Selmo1 LSSSRSQQ------
                 *:.*.:*
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     T A Y Q S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
Sm014266_Selmo1    - - - - - - - - - - - - - - - - V G R G K I E I K R I E N A T S R Q V T F S K R R G G L L K K A H E L S V L C D A Q V A
 
AT4G18960.1     L I V F S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N T G S V A E I - - N A Q Y Y Q Q E S A K L R Q Q I I
Sm014266_Selmo1    L I I F S S T G K L F E Y A S T S M K E I L D R Y G K - Y P E S V Q G G N I A S Q H H D S D Y F S R E V I R L K Q Q L E
 
AT4G18960.1     S I Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L H N
Sm014266_Selmo1    R S Q Q T Q R H L L G D D L A H L A L K D L Q S L E Q Q L E L G L N R I R S R K E Q V F L D E I E D L R R R E L Q L H K
 
AT4G18960.1     D N Q I L R A K I A E N E R N N P S I S L M P G G S N Y E Q L M P P P Q T Q S Q P F D S R N Y F Q V A A L Q P N N H H Y
Sm014266_Selmo1    E N E M L R R R V - - - - - - - - - - - - M Q C P S N F - - - V N P L E T R E P P - - - - - S F G N A S L S - - - - - -
 
AT4G18960.1     S S A G R Q D Q T A L Q L V
Sm014266_Selmo1    L S S S R S Q Q - - - - - -
 
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