fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014293 not found in 224aa AT4G09960.1 not_not 0.528017241 III
Pt013106 not found in 223aa AT4G09960.1 not_not 0.525862068 III
Pt013105 not found in 224aa AT4G09960.3 not_not 0.519396551 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18960.1     TAYQSELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
pt013105_POPTR_ ----------------MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
pt013106_POPTR_ ----------------MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
pt014293_POPTR_ ----------------MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVS
                                 ******************************************:

AT4G18960.1     LIVFSSRGRLYEYSNNS-VKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIIS
pt013105_POPTR_ LIVFSSRGRLYEYANNNSIRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQM
pt013106_POPTR_ LIVFSSRGRLYEYANNN-IRSTIDRYKKASSDSSNASSITEINAQYYQQESAKLRQQIQM
pt014293_POPTR_ LIVFSSRGRLYEYANNN-IRSTIDRYKKVSSDSSNTASITEINAQYYQQESAKMRQQIQL
                *************:**. ::.**:****. **.**:.*::*************:****  

AT4G18960.1     IQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHND
pt013105_POPTR_ LQNSNRHLMGDAVSNLSVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENE
pt013106_POPTR_ LQNSNRHLMGDAVSNLSVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENE
pt014293_POPTR_ LQNSNRHLMGEAVSNLSVKELKQLENRLERGMTRIRSKKHELLLAEIEYMQKREIELENE
                :*****:***:::..:* ***::**.****.:*******:***::**:*:****::*.*:

AT4G18960.1     NQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQ-----PN
pt013105_POPTR_ SVCLRTKIAEVERLQQANMVTGAELNAIQALAA---------SRNFFAPHLLEGGTAYPH
pt013106_POPTR_ SVCLRTKIAEVERLQQANMVTGAELNAIQALAA---------SRNFFAPHLLEGGTAYPH
pt014293_POPTR_ SACLRTKIAEVERLQQANMVTGEELNAIQALAA---------SRNFFAPHFLEGGTAYPH
                .  **:**** ** : :  :     *  * :..         ***:*    *:     *:

AT4G18960.1     NHHYSSAGRQDQTALQLV
pt013105_POPTR_ N---------DKKILHLG
pt013106_POPTR_ N---------DKKILHLG
pt014293_POPTR_ TY--------NKKILHLG
                .         ::. *:*
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     T A Y Q S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
pt013105_POPTR_    - - - - - - - - - - - - - - - - M G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
pt013106_POPTR_    - - - - - - - - - - - - - - - - M G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
pt014293_POPTR_    - - - - - - - - - - - - - - - - M G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V S
 
AT4G18960.1     L I V F S S R G R L Y E Y S N N S - V K G T I E R Y K K A I S D N S N T G S V A E I N A Q Y Y Q Q E S A K L R Q Q I I S
pt013105_POPTR_    L I V F S S R G R L Y E Y A N N N S I R S T I D R Y K K A S S D S S N A S S I T E I N A Q Y Y Q Q E S A K L R Q Q I Q M
pt013106_POPTR_    L I V F S S R G R L Y E Y A N N N - I R S T I D R Y K K A S S D S S N A S S I T E I N A Q Y Y Q Q E S A K L R Q Q I Q M
pt014293_POPTR_    L I V F S S R G R L Y E Y A N N N - I R S T I D R Y K K V S S D S S N T A S I T E I N A Q Y Y Q Q E S A K M R Q Q I Q L
 
AT4G18960.1     I Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L H N D
pt013105_POPTR_    L Q N S N R H L M G D A V S N L S V K E L K Q L E N R L E R G I T R I R S K K H E L L L A E I E Y L Q K R E I E L E N E
pt013106_POPTR_    L Q N S N R H L M G D A V S N L S V K E L K Q L E N R L E R G I T R I R S K K H E L L L A E I E Y L Q K R E I E L E N E
pt014293_POPTR_    L Q N S N R H L M G E A V S N L S V K E L K Q L E N R L E R G M T R I R S K K H E L L L A E I E Y M Q K R E I E L E N E
 
AT4G18960.1     N Q I L R A K I A E N E R N N P S I S L M P G G S N Y E Q L M P P P Q T Q S Q P F D S R N Y F Q V A A L Q - - - - - P N
pt013105_POPTR_    S V C L R T K I A E V E R L Q Q A N M V T G A E L N A I Q A L A A - - - - - - - - - S R N F F A P H L L E G G T A Y P H
pt013106_POPTR_    S V C L R T K I A E V E R L Q Q A N M V T G A E L N A I Q A L A A - - - - - - - - - S R N F F A P H L L E G G T A Y P H
pt014293_POPTR_    S A C L R T K I A E V E R L Q Q A N M V T G E E L N A I Q A L A A - - - - - - - - - S R N F F A P H F L E G G T A Y P H
 
AT4G18960.1     N H H Y S S A G R Q D Q T A L Q L V
pt013105_POPTR_    N - - - - - - - - - D K K I L H L G
pt013106_POPTR_    N - - - - - - - - - D K K I L H L G
pt014293_POPTR_    T Y - - - - - - - - N K K I L H L G
 
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