fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019599 not found in 241aa AT4G18960.1 1st_1st 0.698275862 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18960.1     TAYQSELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
pt019599_POPTR_ MEYQNE-SLESSPLRKLGRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVA
                  **.* . :****** ****:*******************.******************

AT4G18960.1     LIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISI
pt019599_POPTR_ LIVFSSRGRLYEYSNDSVKSTIERYKKASADSSNTGSVSEANAQYYQQEAAKLRSQIGNL
                ***************:***.******** :*.******:* ********:****.** .:

AT4G18960.1     QNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDN
pt019599_POPTR_ QNSNRHMLGEALSSLSVKELKSLEIRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNNN
                *****:::**::.*:* ***:.** ***:.*:***********:**:***********:*

AT4G18960.1     QILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSS
pt019599_POPTR_ QLLRAKISENERKRQSMNLMPGGADFEIV------QSQPYDSRNYSQVNGLQPASHY---
                *:*****:****:. *:.*****:::* :      ****:***** ** .*** .*:   

AT4G18960.1     AGRQDQTALQLV
pt019599_POPTR_ -SHQDQMALQLV
                 .:*** *****
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     T A Y Q S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
pt019599_POPTR_    M E Y Q N E - S L E S S P L R K L G R G K V E I K R I E N T T N R Q V T F C K R R S G L L K K A Y E L S V L C D A E V A
 
AT4G18960.1     L I V F S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N T G S V A E I N A Q Y Y Q Q E S A K L R Q Q I I S I
pt019599_POPTR_    L I V F S S R G R L Y E Y S N D S V K S T I E R Y K K A S A D S S N T G S V S E A N A Q Y Y Q Q E A A K L R S Q I G N L
 
AT4G18960.1     Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L H N D N
pt019599_POPTR_    Q N S N R H M L G E A L S S L S V K E L K S L E I R L E K G I S R I R S K K N E L L F A E I E Y M Q K R E V D L H N N N
 
AT4G18960.1     Q I L R A K I A E N E R N N P S I S L M P G G S N Y E Q L M P P P Q T Q S Q P F D S R N Y F Q V A A L Q P N N H H Y S S
pt019599_POPTR_    Q L L R A K I S E N E R K R Q S M N L M P G G A D F E I V - - - - - - Q S Q P Y D S R N Y S Q V N G L Q P A S H Y - - -
 
AT4G18960.1     A G R Q D Q T A L Q L V
pt019599_POPTR_    - S H Q D Q M A L Q L V
 
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