fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005070 not found in 265aa AT2G42830.1 not_not 0.502155172 III
Os040449 not found in 270aa AT2G42830.1 not_not 0.482758620 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18960.1     TAYQSELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
Os040449_Os12t0 ----------------MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVA
Os005070_Os01t0 ----------------MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIA
                                 ***:********.*.*******************::*****:*

AT4G18960.1     LIVFSSRGRLYEYSN-NSVKGTIERYKKAISDNSNTG--SVAEINA-QYYQQESAKLRQQ
Os040449_Os12t0 LIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSG-APLIEVNAQQYYQQESAKLRHQ
Os005070_Os01t0 LIVFSSRGRLYEFSNVNSTRSTIERYKKASA--STSGSAPVIDVNSHQYFQQEAAKMRHQ
                ************:** *..:.**:***** :  *.:*  .: ::*: **:***:**:*:*

AT4G18960.1     IISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDL
Os040449_Os12t0 IQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIEL
Os005070_Os01t0 IQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADL
                *  :**:*::*:*:.:..:: ***:.**.***:.*::**::*:*** ***:** *** :*

AT4G18960.1     HNDNQILRAKIAENER---------NNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQ
Os040449_Os12t0 QNDNMDLRTKIAEEEQ-QLQQVTVARSAAMELQAAAAAQQQQQNPFAVAAAQLDMKCFF-
Os005070_Os01t0 QNENMFLRAKVAEAERAEHDDQQAAEDDEMAPAPAVGGGSSSGTELEALPATFDTREYYQ
                :*:*  **:*:** *:         ..  :   .. .  ..      . .  :* : :: 

AT4G18960.1     VAALQPNNHHYSSA----------GRQDQ---TALQLV--------------------
Os040449_Os12t0 -----PLNLFEAAAQVQAVAAQ----RQQIIPTELNLGYHHHLAIPGAAAADAPPPHF
Os005070_Os01t0 PA--PPVSMLAAAA--AAAAAQYSSDHHQ---TALHLGYFKVDSGKGGLL--------
                     * .   ::*            :.*   * *:*
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     T A Y Q S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
Os040449_Os12t0    - - - - - - - - - - - - - - - - M G R G R I E I K R I E N T T S R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
Os005070_Os01t0    - - - - - - - - - - - - - - - - M G R G K I E I K R I E N K T S R Q V T F C K R R N G L L K K A Y E L A I L C D A E I A
 
AT4G18960.1     L I V F S S R G R L Y E Y S N - N S V K G T I E R Y K K A I S D N S N T G - - S V A E I N A - Q Y Y Q Q E S A K L R Q Q
Os040449_Os12t0    L I V F S S R G R L Y E Y S N N N N V K A T I D R Y K K A H A C G S T S G - A P L I E V N A Q Q Y Y Q Q E S A K L R H Q
Os005070_Os01t0    L I V F S S R G R L Y E F S N V N S T R S T I E R Y K K A S A - - S T S G S A P V I D V N S H Q Y F Q Q E A A K M R H Q
 
AT4G18960.1     I I S I Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L
Os040449_Os12t0    I Q M L Q N T N K H L V G D N V S N L S L K E L K Q L E S R L E K G I S K I R A R K N E L L A S E I N Y M A K R E I E L
Os005070_Os01t0    I Q T L Q N A N R H L I G E S I G N M T A K E L K S L E N R L E K G I S R I R S K K H E L L F S E I E Y M Q K R E A D L
 
AT4G18960.1     H N D N Q I L R A K I A E N E R - - - - - - - - - N N P S I S L M P G G S N Y E Q L M P P P Q T Q S Q P F D S R N Y F Q
Os040449_Os12t0    Q N D N M D L R T K I A E E E Q - Q L Q Q V T V A R S A A M E L Q A A A A A Q Q Q Q Q N P F A V A A A Q L D M K C F F -
Os005070_Os01t0    Q N E N M F L R A K V A E A E R A E H D D Q Q A A E D D E M A P A P A V G G G S S S G T E L E A L P A T F D T R E Y Y Q
 
AT4G18960.1     V A A L Q P N N H H Y S S A - - - - - - - - - - G R Q D Q - - - T A L Q L V - - - - - - - - - - - - - - - - - - - -
Os040449_Os12t0    - - - - - P L N L F E A A A Q V Q A V A A Q - - - - R Q Q I I P T E L N L G Y H H H L A I P G A A A A D A P P P H F
Os005070_Os01t0    P A - - P P V S M L A A A A - - A A A A A Q Y S S D H H Q - - - T A L H L G Y F K V D S G K G G L L - - - - - - - -
 
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