fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os020555 not found in 233aa AT4G18960.1 1st_1st 0.521551724 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18960.1     -TAYQSE--------LGGDSSPLRKSG-----------------RGKIEIKRIENTTNRQ
Os020555_Os05t0 MHIYKEQEAEPSTGLMMPEPAPVASPGSGGSGGSGSVGAEKIGSRGKIEIKRIENTTNRQ
                   *:.:        :  :.:*: ..*                 ****************

AT4G18960.1     VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSN
Os020555_Os05t0 VTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSN
                *******.*******************:***************** ******** **.**

AT4G18960.1     TGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRI
Os020555_Os05t0 ASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKI
                :.:*******:****:***:*** .:***** *:*:.* :*. :**::*****::.: :*

AT4G18960.1     RSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQ
Os020555_Os05t0 RARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQTVNMMGSASTSE-------
                *::***** :**:***:**.:*:***  *::*:**.**.  ::.:* ..*. *       

AT4G18960.1     TQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQLV
Os020555_Os05t0 --------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     - T A Y Q S E - - - - - - - - L G G D S S P L R K S G - - - - - - - - - - - - - - - - - R G K I E I K R I E N T T N R Q
Os020555_Os05t0    M H I Y K E Q E A E P S T G L M M P E P A P V A S P G S G G S G G S G S V G A E K I G S R G K I E I K R I E N T T N R Q
 
AT4G18960.1     V T F C K R R N G L L K K A Y E L S V L C D A E V A L I V F S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N
Os020555_Os05t0    V T F C K R R S G L L K K A Y E L S V L C D A E V A L V V F S S R G R L Y E Y S N N S V K E T I E R Y K K A N S D T S N
 
AT4G18960.1     T G S V A E I N A Q Y Y Q Q E S A K L R Q Q I I S I Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I
Os020555_Os05t0    A S T V A E I N A Q H Y Q Q E A A K L K Q Q I T N L Q N S N R T L V G D N I T T M N H R E L K Q L E G R L D K G L G K I
 
AT4G18960.1     R S K K N E L L F S E I D Y M Q K R E V D L H N D N Q I L R A K I A E N E R N N P S I S L M P G G S N Y E Q L M P P P Q
Os020555_Os05t0    R A R K N E L L C A E I E Y M Q R R E T E L Q N D N M Y L K S K V A E S E R G L Q T V N M M G S A S T S E - - - - - - -
 
AT4G18960.1     T Q S Q P F D S R N Y F Q V A A L Q P N N H H Y S S A G R Q D Q T A L Q L V
Os020555_Os05t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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