fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os020555 not found in 233aa AT4G18960.1 1st_1st 0.521551724 Ia
Os005070 not found in 265aa AT2G42830.1 not_not 0.502155172 III
Os040449 not found in 270aa AT2G42830.1 not_not 0.482758620 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18960.1     -TAYQSE--------LGGDSSPLRKSG-----------------RGKIEIKRIENTTNRQ
Os040449_Os12t0 -------------------------MG-----------------RGRIEIKRIENTTSRQ
Os005070_Os01t0 -------------------------MG-----------------RGKIEIKRIENKTSRQ
Os020555_Os05t0 MHIYKEQEAEPSTGLMMPEPAPVASPGSGGSGGSGSVGAEKIGSRGKIEIKRIENTTNRQ
                                          *                 **:********.*.**

AT4G18960.1     VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN-NSVKGTIERYKKAISDNS
Os040449_Os12t0 VTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGS
Os005070_Os01t0 VTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTS
Os020555_Os05t0 VTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN-NSVKETIERYKKANSDTS
                *******.*********::*****:**:**********:** *..: **:***** :  *

AT4G18960.1     NTG-SVAEINA-QYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSI
Os040449_Os12t0 TSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGI
Os005070_Os01t0 GSA-PVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGI
Os020555_Os05t0 NAS-TVAEINA-QHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGL
                 :. .: ::*: *::***:**:::**  :**:*: *:*:.: .:. :**:.**.**::.:

AT4G18960.1     TRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERN-------------NPSIS
Os040449_Os12t0 SKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQQ---LQQVTVAR--SAAME
Os005070_Os01t0 SRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEHDDQQAAEDDEMAPAPA
Os020555_Os05t0 GKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERG-------------LQTVN
                 :**::*:*** :**:** :** :*:*:*  *::*:** *:                :  

AT4G18960.1     LMPGGSNYEQLMPPPQTQSQPFDSRNYFQ----------------VAALQPN--------
Os040449_Os12t0 LQAAAAAQQQQQNPFAVAAAQLDMKCFF----PLNLFEAAAQVQAVAAQRQQIIPTELNL
Os005070_Os01t0 VGGGSSSGTELEALPAT----FDTREYYQPAPPVSMLAAAA--AAAAAQYSS--------
Os020555_Os05t0 MMGSASTSE---------------------------------------------------
                :  ..:                                                      

AT4G18960.1     --NHHYS--SAGRQDQTALQLV------------
Os040449_Os12t0 GYHHHLAIPGAAAADAPPPHF-------------
Os005070_Os01t0 --DHH----------QTALHLGYFKVDSGKGGLL
Os020555_Os05t0 ----------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     - T A Y Q S E - - - - - - - - L G G D S S P L R K S G - - - - - - - - - - - - - - - - - R G K I E I K R I E N T T N R Q
Os040449_Os12t0    - - - - - - - - - - - - - - - - - - - - - - - - - M G - - - - - - - - - - - - - - - - - R G R I E I K R I E N T T S R Q
Os005070_Os01t0    - - - - - - - - - - - - - - - - - - - - - - - - - M G - - - - - - - - - - - - - - - - - R G K I E I K R I E N K T S R Q
Os020555_Os05t0    M H I Y K E Q E A E P S T G L M M P E P A P V A S P G S G G S G G S G S V G A E K I G S R G K I E I K R I E N T T N R Q
 
AT4G18960.1     V T F C K R R N G L L K K A Y E L S V L C D A E V A L I V F S S R G R L Y E Y S N - N S V K G T I E R Y K K A I S D N S
Os040449_Os12t0    V T F C K R R N G L L K K A Y E L S V L C D A E V A L I V F S S R G R L Y E Y S N N N N V K A T I D R Y K K A H A C G S
Os005070_Os01t0    V T F C K R R N G L L K K A Y E L A I L C D A E I A L I V F S S R G R L Y E F S N V N S T R S T I E R Y K K A S A S T S
Os020555_Os05t0    V T F C K R R S G L L K K A Y E L S V L C D A E V A L V V F S S R G R L Y E Y S N - N S V K E T I E R Y K K A N S D T S
 
AT4G18960.1     N T G - S V A E I N A - Q Y Y Q Q E S A K L R Q Q I I S I Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I
Os040449_Os12t0    T S G A P L I E V N A Q Q Y Y Q Q E S A K L R H Q I Q M L Q N T N K H L V G D N V S N L S L K E L K Q L E S R L E K G I
Os005070_Os01t0    G S A - P V I D V N S H Q Y F Q Q E A A K M R H Q I Q T L Q N A N R H L I G E S I G N M T A K E L K S L E N R L E K G I
Os020555_Os05t0    N A S - T V A E I N A - Q H Y Q Q E A A K L K Q Q I T N L Q N S N R T L V G D N I T T M N H R E L K Q L E G R L D K G L
 
AT4G18960.1     T R I R S K K N E L L F S E I D Y M Q K R E V D L H N D N Q I L R A K I A E N E R N - - - - - - - - - - - - - N P S I S
Os040449_Os12t0    S K I R A R K N E L L A S E I N Y M A K R E I E L Q N D N M D L R T K I A E E E Q Q - - - L Q Q V T V A R - - S A A M E
Os005070_Os01t0    S R I R S K K H E L L F S E I E Y M Q K R E A D L Q N E N M F L R A K V A E A E R A E H D D Q Q A A E D D E M A P A P A
Os020555_Os05t0    G K I R A R K N E L L C A E I E Y M Q R R E T E L Q N D N M Y L K S K V A E S E R G - - - - - - - - - - - - - L Q T V N
 
AT4G18960.1     L M P G G S N Y E Q L M P P P Q T Q S Q P F D S R N Y F Q - - - - - - - - - - - - - - - - V A A L Q P N - - - - - - - -
Os040449_Os12t0    L Q A A A A A Q Q Q Q Q N P F A V A A A Q L D M K C F F - - - - P L N L F E A A A Q V Q A V A A Q R Q Q I I P T E L N L
Os005070_Os01t0    V G G G S S S G T E L E A L P A T - - - - F D T R E Y Y Q P A P P V S M L A A A A - - A A A A A Q Y S S - - - - - - - -
Os020555_Os05t0    M M G S A S T S E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G18960.1     - - N H H Y S - - S A G R Q D Q T A L Q L V - - - - - - - - - - - -
Os040449_Os12t0    G Y H H H L A I P G A A A A D A P P P H F - - - - - - - - - - - - -
Os005070_Os01t0    - - D H H - - - - - - - - - - Q T A L H L G Y F K V D S G K G G L L
Os020555_Os05t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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