fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009126 not found in 277aa AT4G18960.1 not_1st 0.512931034 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18960.1     TAYQSELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
Sb009126_Sorbi1 ----------------MGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSILCDAEIA
                                 **************.********************:*****:*

AT4G18960.1     LIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINA-QYYQQESAKLRQQIIS
Sb009126_Sorbi1 LVIFSSRGRLYEYSSNSVRSTIERYKKASASTSGTAPVIDVNSLQFFQQETAKLRQQIQT
                *::***********.***:.******** :..*.*..* ::*: *::***:******* :

AT4G18960.1     IQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHND
Sb009126_Sorbi1 LQNSNRHLMGESIGNMTAKELKGLENRLERGIGRIRSKKNELLLAEIEYMQKREADLHNE
                :*****:****:**.*:.***:.**.****.* **********::**:******.****:

AT4G18960.1     NQILRAKIAENER--------NNPSISLMP---GGSNYEQLMPPPQTQSQPFDSR--NYF
Sb009126_Sorbi1 NMFLRAKVAEVERALQQEAAAEDQTMAMGPAAVGGATTELKALPAS-----FDPRGYGYY
                * :****:** **        :: :::: *   **:. *    *..     **.*  .*:

AT4G18960.1     Q--------VAALQPNNHHYSS----AGRQD-----QTALQLV---------------
Sb009126_Sorbi1 QQQQQQHVLAAASAASSSQYSEQPQGQGQQEYEYHHQTALHLGYHVKIHSAAGGKGFL
                *        .**  ... :**.     *:*:     ****:*
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     T A Y Q S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
Sb009126_Sorbi1    - - - - - - - - - - - - - - - - M G R G K I E I K R I E N T T S R Q V T F C K R R N G L L K K A Y E L S I L C D A E I A
 
AT4G18960.1     L I V F S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N T G S V A E I N A - Q Y Y Q Q E S A K L R Q Q I I S
Sb009126_Sorbi1    L V I F S S R G R L Y E Y S S N S V R S T I E R Y K K A S A S T S G T A P V I D V N S L Q F F Q Q E T A K L R Q Q I Q T
 
AT4G18960.1     I Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L H N D
Sb009126_Sorbi1    L Q N S N R H L M G E S I G N M T A K E L K G L E N R L E R G I G R I R S K K N E L L L A E I E Y M Q K R E A D L H N E
 
AT4G18960.1     N Q I L R A K I A E N E R - - - - - - - - N N P S I S L M P - - - G G S N Y E Q L M P P P Q T Q S Q P F D S R - - N Y F
Sb009126_Sorbi1    N M F L R A K V A E V E R A L Q Q E A A A E D Q T M A M G P A A V G G A T T E L K A L P A S - - - - - F D P R G Y G Y Y
 
AT4G18960.1     Q - - - - - - - - V A A L Q P N N H H Y S S - - - - A G R Q D - - - - - Q T A L Q L V - - - - - - - - - - - - - - -
Sb009126_Sorbi1    Q Q Q Q Q Q H V L A A A S A A S S S Q Y S E Q P Q G Q G Q Q E Y E Y H H Q T A L H L G Y H V K I H S A A G G K G F L
 
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