fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031546 not found in 374aa AT3G58780.1 not_not 0.459051724 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18960.1     TAYQSELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
Sb031546_Sorbi1 ---QRE---EQAAISSMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVA
                   * *   :.:.: . ***:********.*.****************************

AT4G18960.1     LIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTG-SVAEINA-QYYQQESAKLRQQII
Sb031546_Sorbi1 LIVFSSRGRLYEYANNSVKATIERYKKVHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQ
                *************:*****.*******. : .*.:* .: * ** *:*********:** 

AT4G18960.1     SIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHN
Sb031546_Sorbi1 MLQNTNRHLVGDSVGNLTLKELKQLESRLEKGISKVRARKNELLAAEINYMAKRETELQN
                 :**:**:*:*:::*.:: ***::**.***:.*:::*::***** :**:** ***.:*:*

AT4G18960.1     DNQILRAKIAENERN---------------------NPSISL-----MPGG---------
Sb031546_Sorbi1 DHMNLRTKIEEGEQQLQQVTVARSVAAAAAATNVELNPFLEMDTKCFFPGGPFATLDMKC
                *:  **:** *.*::                     ** :.:     :***         

AT4G18960.1     ---SNYEQLMPPPQTQSQPFDSR-NY-FQVA-----ALQPNNHHYSSAGRQDQTALQLV
Sb031546_Sorbi1 FFPGGYQMLEATAAQHRQMLTTELNLGYQLALPNSDAANNNPHQF--------------
                   ..*: * ...  : * : :. *  :*:*     * : * *::
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     T A Y Q S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
Sb031546_Sorbi1    - - - Q R E - - - E Q A A I S S M G R G R I E I K R I E N N T S R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
 
AT4G18960.1     L I V F S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N T G - S V A E I N A - Q Y Y Q Q E S A K L R Q Q I I
Sb031546_Sorbi1    L I V F S S R G R L Y E Y A N N S V K A T I E R Y K K V H T V G S S S G P P L L E H N A Q Q F Y Q Q E S A K L R N Q I Q
 
AT4G18960.1     S I Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L H N
Sb031546_Sorbi1    M L Q N T N R H L V G D S V G N L T L K E L K Q L E S R L E K G I S K V R A R K N E L L A A E I N Y M A K R E T E L Q N
 
AT4G18960.1     D N Q I L R A K I A E N E R N - - - - - - - - - - - - - - - - - - - - - N P S I S L - - - - - M P G G - - - - - - - - -
Sb031546_Sorbi1    D H M N L R T K I E E G E Q Q L Q Q V T V A R S V A A A A A A T N V E L N P F L E M D T K C F F P G G P F A T L D M K C
 
AT4G18960.1     - - - S N Y E Q L M P P P Q T Q S Q P F D S R - N Y - F Q V A - - - - - A L Q P N N H H Y S S A G R Q D Q T A L Q L V
Sb031546_Sorbi1    F F P G G Y Q M L E A T A A Q H R Q M L T T E L N L G Y Q L A L P N S D A A N N N P H Q F - - - - - - - - - - - - - -
 
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