fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024556 not found in 435aa AT4G18960.1 1st_1st 0.588362068 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18960.1     --------------------------------------------------------TAYQ
Sb024556_Sorbi1 LPFNTSPSSSSPSLLLSPHILFQFPPWISSCMQRGTAAPPPPPPMLNMMTDLSCRPSEVT
                                                                        :   

AT4G18960.1     SELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF
Sb024556_Sorbi1 EQLAAPTGSGDKQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF
                .:*.. :..  *.***********************************************

AT4G18960.1     SSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSN
Sb024556_Sorbi1 SSRGRLYEYANNSVKSTIERYKKANSDTSNSGTVAEVSAQHYQQESSKLRQTISSLQNAN
                *********:*****.******** **.**:*:***:.**:*****:**** * *:**:*

AT4G18960.1     RQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILR
Sb024556_Sorbi1 RTIVGDSIHTMSLRDLKQLEGRLEKGISKIRARKNELLYAEVDYMQKREMDLQTDNMYLR
                * ::*::* :** ::*::******:.*::**::*****::*:*******:**:.**  **

AT4G18960.1     AKIAE-NERNNPSISLM--PGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSA
Sb024556_Sorbi1 SKIAENNETGQPAMNMMGVPSTSEYEHMV--------PFDSRNFLQVNIMQ-QPQHYSH-
                :**** ** .:*::.:*  *. *:**:::        ******::**  :* : :***  

AT4G18960.1     GRQDQTALQLV
Sb024556_Sorbi1 -QLQPTTLQLG
                 : : *:***
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T A Y Q
Sb024556_Sorbi1    L P F N T S P S S S S P S L L L S P H I L F Q F P P W I S S C M Q R G T A A P P P P P P M L N M M T D L S C R P S E V T
 
AT4G18960.1     S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A L I V F
Sb024556_Sorbi1    E Q L A A P T G S G D K Q G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A L I V F
 
AT4G18960.1     S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N T G S V A E I N A Q Y Y Q Q E S A K L R Q Q I I S I Q N S N
Sb024556_Sorbi1    S S R G R L Y E Y A N N S V K S T I E R Y K K A N S D T S N S G T V A E V S A Q H Y Q Q E S S K L R Q T I S S L Q N A N
 
AT4G18960.1     R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L H N D N Q I L R
Sb024556_Sorbi1    R T I V G D S I H T M S L R D L K Q L E G R L E K G I S K I R A R K N E L L Y A E V D Y M Q K R E M D L Q T D N M Y L R
 
AT4G18960.1     A K I A E - N E R N N P S I S L M - - P G G S N Y E Q L M P P P Q T Q S Q P F D S R N Y F Q V A A L Q P N N H H Y S S A
Sb024556_Sorbi1    S K I A E N N E T G Q P A M N M M G V P S T S E Y E H M V - - - - - - - - P F D S R N F L Q V N I M Q - Q P Q H Y S H -
 
AT4G18960.1     G R Q D Q T A L Q L V
Sb024556_Sorbi1    - Q L Q P T T L Q L G
 
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