fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024556 not found in 435aa AT4G18960.1 1st_1st 0.588362068 Ia
Sb009126 not found in 277aa AT4G18960.1 not_1st 0.512931034 II
Sb031546 not found in 374aa AT3G58780.1 not_not 0.459051724 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G18960.1     --------------------------------------------------------TAYQ
Sb031546_Sorbi1 ----------------------------------------------------------QR
Sb009126_Sorbi1 ------------------------------------------------------------
Sb024556_Sorbi1 LPFNTSPSSSSPSLLLSPHILFQFPPWISSCMQRGTAAPPPPPPMLNMMTDLSCRPSEVT
                                                                            

AT4G18960.1     SELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF
Sb031546_Sorbi1 EEQAAISS----MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF
Sb009126_Sorbi1 ------------MGRGKIEIKRIENTTSRQVTFCKRRNGLLKKAYELSILCDAEIALVIF
Sb024556_Sorbi1 EQLAAPTGSGDKQGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF
                             ***:********.*.********************:*****:**::*

AT4G18960.1     SSRGRLYEYSNNSVKGTIERYKKAISDNSNTG-SVAEINA-QYYQQESAKLRQQIISIQN
Sb031546_Sorbi1 SSRGRLYEYANNSVKATIERYKKVHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQN
Sb009126_Sorbi1 SSRGRLYEYSSNSVRSTIERYKKASASTSGTA-PVIDVNSLQFFQQETAKLRQQIQTLQN
Sb024556_Sorbi1 SSRGRLYEYANNSVKSTIERYKKANSDTSNSG-TVAEVSA-QHYQQESSKLRQTISSLQN
                *********:.***:.*******. :  *.:. .: : .: *.:***::***: *  :**

AT4G18960.1     SNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQI
Sb031546_Sorbi1 TNRHLVGDSVGNLTLKELKQLESRLEKGISKVRARKNELLAAEINYMAKRETELQNDHMN
Sb009126_Sorbi1 SNRHLMGESIGNMTAKELKGLENRLERGIGRIRSKKNELLLAEIEYMQKREADLHNENMF
Sb024556_Sorbi1 ANRTIVGDSIHTMSLRDLKQLEGRLEKGISKIRARKNELLYAEVDYMQKREMDLQTDNMY
                :** ::*::: .:: ::*: **.***:.* ::*::***** :*::** *** :*:.::  

AT4G18960.1     LRAKIAE------NERNNPSISLM--P---GGSNYEQLMPPPQTQSQPF---DSR-----
Sb031546_Sorbi1 LRTKIEEGEQQLQQVTVARSVAAAA-----AATNVEL---------NPFLEMDTKCFFPG
Sb009126_Sorbi1 LRAKVAEVERALQQEAAAEDQTMAMGPAAVGGATTELKALPA-----SF---DPRG----
Sb024556_Sorbi1 LRSKIAE-----NNETGQPAMNMMGVP---STSEYEHMV--------PF---DSR-----
                **:*: *      :                . :  *           .*   *.:     

AT4G18960.1     -------------NYFQVAALQPNNHH------------YSSA----GRQD-----QTAL
Sb031546_Sorbi1 GPFATLDMKCFFPGGYQMLEAT-AAQH---------------------RQML----TTEL
Sb009126_Sorbi1 ------------YGYYQ----QQQQQHVLAAASAASSSQYSEQPQGQGQQEYEYHHQTAL
Sb024556_Sorbi1 -------------NFLQVNIMQ-QPQH------------YSH------QLQ-----PTTL
                             .  *        :*                     :        * *

AT4G18960.1     QLV-------------------
Sb031546_Sorbi1 NLGYQLALPNSDAANNNPHQF-
Sb009126_Sorbi1 HLGYHVKIHSAAGGKG----FL
Sb024556_Sorbi1 QLG-------------------
                :*
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T A Y Q
Sb031546_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q R
Sb009126_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb024556_Sorbi1    L P F N T S P S S S S P S L L L S P H I L F Q F P P W I S S C M Q R G T A A P P P P P P M L N M M T D L S C R P S E V T
 
AT4G18960.1     S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A L I V F
Sb031546_Sorbi1    E E Q A A I S S - - - - M G R G R I E I K R I E N N T S R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A L I V F
Sb009126_Sorbi1    - - - - - - - - - - - - M G R G K I E I K R I E N T T S R Q V T F C K R R N G L L K K A Y E L S I L C D A E I A L V I F
Sb024556_Sorbi1    E Q L A A P T G S G D K Q G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A L I V F
 
AT4G18960.1     S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N T G - S V A E I N A - Q Y Y Q Q E S A K L R Q Q I I S I Q N
Sb031546_Sorbi1    S S R G R L Y E Y A N N S V K A T I E R Y K K V H T V G S S S G P P L L E H N A Q Q F Y Q Q E S A K L R N Q I Q M L Q N
Sb009126_Sorbi1    S S R G R L Y E Y S S N S V R S T I E R Y K K A S A S T S G T A - P V I D V N S L Q F F Q Q E T A K L R Q Q I Q T L Q N
Sb024556_Sorbi1    S S R G R L Y E Y A N N S V K S T I E R Y K K A N S D T S N S G - T V A E V S A - Q H Y Q Q E S S K L R Q T I S S L Q N
 
AT4G18960.1     S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L H N D N Q I
Sb031546_Sorbi1    T N R H L V G D S V G N L T L K E L K Q L E S R L E K G I S K V R A R K N E L L A A E I N Y M A K R E T E L Q N D H M N
Sb009126_Sorbi1    S N R H L M G E S I G N M T A K E L K G L E N R L E R G I G R I R S K K N E L L L A E I E Y M Q K R E A D L H N E N M F
Sb024556_Sorbi1    A N R T I V G D S I H T M S L R D L K Q L E G R L E K G I S K I R A R K N E L L Y A E V D Y M Q K R E M D L Q T D N M Y
 
AT4G18960.1     L R A K I A E - - - - - - N E R N N P S I S L M - - P - - - G G S N Y E Q L M P P P Q T Q S Q P F - - - D S R - - - - -
Sb031546_Sorbi1    L R T K I E E G E Q Q L Q Q V T V A R S V A A A A - - - - - A A T N V E L - - - - - - - - - N P F L E M D T K C F F P G
Sb009126_Sorbi1    L R A K V A E V E R A L Q Q E A A A E D Q T M A M G P A A V G G A T T E L K A L P A - - - - - S F - - - D P R G - - - -
Sb024556_Sorbi1    L R S K I A E - - - - - N N E T G Q P A M N M M G V P - - - S T S E Y E H M V - - - - - - - - P F - - - D S R - - - - -
 
AT4G18960.1     - - - - - - - - - - - - - N Y F Q V A A L Q P N N H H - - - - - - - - - - - - Y S S A - - - - G R Q D - - - - - Q T A L
Sb031546_Sorbi1    G P F A T L D M K C F F P G G Y Q M L E A T - A A Q H - - - - - - - - - - - - - - - - - - - - - R Q M L - - - - T T E L
Sb009126_Sorbi1    - - - - - - - - - - - - Y G Y Y Q - - - - Q Q Q Q Q H V L A A A S A A S S S Q Y S E Q P Q G Q G Q Q E Y E Y H H Q T A L
Sb024556_Sorbi1    - - - - - - - - - - - - - N F L Q V N I M Q - Q P Q H - - - - - - - - - - - - Y S H - - - - - - Q L Q - - - - - P T T L
 
AT4G18960.1     Q L V - - - - - - - - - - - - - - - - - - -
Sb031546_Sorbi1    N L G Y Q L A L P N S D A A N N N P H Q F -
Sb009126_Sorbi1    H L G Y H V K I H S A A G G K G - - - - F L
Sb024556_Sorbi1    Q L G - - - - - - - - - - - - - - - - - - -
 
0