fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G18960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041633 not found in 243aa AT4G18960.1 1st_1st 0.689655172 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G18960.1     TAYQSELGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
gm041633_Glyma1 MVFPNP-SMSVSPQKKMGGGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVA
                 .: .  . . ** :* * *****************************************

AT4G18960.1     LIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISI
gm041633_Glyma1 LIVFSSRGRLYEYANNSVKATIERYKKACSDSSGAGSASEANAQFYQQEADKLRAQISSL
                *************:*****.******** **.*.:**.:* ***:****: *** ** *:

AT4G18960.1     QNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDN
gm041633_Glyma1 QNNNRQMMGESLGPLTAKELKNLETKLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNN
                **.***:***::*.::.***:*** :**:.*:***********:**:******:****:*

AT4G18960.1     QILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSS
gm041633_Glyma1 QLLRAKIAEGERNHHNLAVLPGGSNYDSL----QTSQQQFDSRGYFQVTGLQPNNQY---
                *:*******.***: .::::******:.*    **..* ****.****:.*****::   

AT4G18960.1     AGRQDQTALQLV
gm041633_Glyma1 -ARQDQMSLQLV
                 .**** :****
BoxShade v3.31 C (beta, 970507) Output
AT4G18960.1     T A Y Q S E L G G D S S P L R K S G R G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
gm041633_Glyma1    M V F P N P - S M S V S P Q K K M G G G K I E I K R I E N T T N R Q V T F C K R R N G L L K K A Y E L S V L C D A E V A
 
AT4G18960.1     L I V F S S R G R L Y E Y S N N S V K G T I E R Y K K A I S D N S N T G S V A E I N A Q Y Y Q Q E S A K L R Q Q I I S I
gm041633_Glyma1    L I V F S S R G R L Y E Y A N N S V K A T I E R Y K K A C S D S S G A G S A S E A N A Q F Y Q Q E A D K L R A Q I S S L
 
AT4G18960.1     Q N S N R Q L M G E T I G S M S P K E L R N L E G R L E R S I T R I R S K K N E L L F S E I D Y M Q K R E V D L H N D N
gm041633_Glyma1    Q N N N R Q M M G E S L G P L T A K E L K N L E T K L E K G I S R I R S K K N E L L F A E I E Y M Q K R E I D L H N N N
 
AT4G18960.1     Q I L R A K I A E N E R N N P S I S L M P G G S N Y E Q L M P P P Q T Q S Q P F D S R N Y F Q V A A L Q P N N H H Y S S
gm041633_Glyma1    Q L L R A K I A E G E R N H H N L A V L P G G S N Y D S L - - - - Q T S Q Q Q F D S R G Y F Q V T G L Q P N N Q Y - - -
 
AT4G18960.1     A G R Q D Q T A L Q L V
gm041633_Glyma1    - A R Q D Q M S L Q L V
 
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