fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G20970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024771 not found in 235aa AT4G20970.1 1st_1st 0.447976878 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G20970.1     ------MEP-------------------------------------------SHSNTGQS
pt024771_POPTR_ MYHKSLLDPIKQRQASISNYIGREIHICIVVQSSSFFFFLEVVLATIAASTLMENNPSSS
                      ::*                                            ..*...*

AT4G20970.1     RSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTEP-LTLPDQLDEAANYIKKLQVNVEKK
pt024771_POPTR_ RT-DRKTIERNRRNQMKALYSQLNSLVPHQSSREPVLSLPDQLDEAASYIKRLQTNLERM
                *: ****:*:*** ***:***:* **:**:** ** *:*********.***:**.*:*: 

AT4G20970.1     RERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHIFLVTSLEHKF
pt024771_POPTR_ KEKKDNLMGT---ERKN---YASMSSCNGTTTGLRSPQIEIRETGSTLEVVLITGLDGQF
                :*:* **:.*   *: *    :*:**. ..:.  : *:***:**** :.:.*:*.*: :*

AT4G20970.1     MFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEH--DYGARSQIPERLEKIV--
pt024771_POPTR_ MFNETIRVLHEE-GAEIINASFSVVEDTVFHTIHSKVGDSAPSNGA-ARISQRLNQFVQD
                ** * **** ** **** :*.:*:*:*:****:*.** :   . ** ::*.:**:::*  

AT4G20970.1     -NSVH
pt024771_POPTR_ DNAL-
                 *::
BoxShade v3.31 C (beta, 970507) Output
AT4G20970.1     - - - - - - M E P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S H S N T G Q S
pt024771_POPTR_    M Y H K S L L D P I K Q R Q A S I S N Y I G R E I H I C I V V Q S S S F F F F L E V V L A T I A A S T L M E N N P S S S
 
AT4G20970.1     R S V D R K T V E K N R R M Q M K S L Y S E L I S L L P H H S S T E P - L T L P D Q L D E A A N Y I K K L Q V N V E K K
pt024771_POPTR_    R T - D R K T I E R N R R N Q M K A L Y S Q L N S L V P H Q S S R E P V L S L P D Q L D E A A S Y I K R L Q T N L E R M
 
AT4G20970.1     R E R K R N L V A T T T L E K L N S V G S S S V S S S V D V S V P R K L P K I E I Q E T G S I F H I F L V T S L E H K F
pt024771_POPTR_    K E K K D N L M G T - - - E R K N - - - Y A S M S S C N G T T T G L R S P Q I E I R E T G S T L E V V L I T G L D G Q F
 
AT4G20970.1     M F C E I I R V L T E E L G A E I T H A G Y S I V D D A V F H T L H C K V E E H - - D Y G A R S Q I P E R L E K I V - -
pt024771_POPTR_    M F N E T I R V L H E E - G A E I I N A S F S V V E D T V F H T I H S K V G D S A P S N G A - A R I S Q R L N Q F V Q D
 
AT4G20970.1     - N S V H
pt024771_POPTR_    D N A L -
 
0