fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G20970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041497 not found in 171aa AT4G20970.1 1st_1st 0.395953757 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G20970.1     MEPSHSNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLPHHSSTEPLTLPDQLDEAANYI
gm041497_Glyma1 ME----NNPSSSRVERKIIERNRRNQMKALFRELNSLVPHQSSKEAISLPDQLEEATNYI
                **    *. .*  *:** :*:*** ***:*: ** **:**:**.*.::*****:**:***

AT4G20970.1     KKLQVNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHI
gm041497_Glyma1 KKLQINLEKMKDKKNMLLG---IERPN-VRMNNGGRTVRLNSPR----IEIQQMGSALEV
                ****:*:** :::*. *:.   :*: * *  .. . :* :. **    ****: ** :.:

AT4G20970.1     FLVTSLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEEHDYGARSQIPE
gm041497_Glyma1 VLITGFDCQFMFSETIRVLHEE-GVDVVNASYKVIEGAVFHSIHCQLIS-----------
                .*:*.:: :***.* **** ** *.::.:*.*.:::.****::**:: .           

AT4G20970.1     RLEKIVNSVH------
gm041497_Glyma1 -LHHIINLLHICFFFF
                 *.:*:* :*
BoxShade v3.31 C (beta, 970507) Output
AT4G20970.1     M E P S H S N T G Q S R S V D R K T V E K N R R M Q M K S L Y S E L I S L L P H H S S T E P L T L P D Q L D E A A N Y I
gm041497_Glyma1    M E - - - - N N P S S S R V E R K I I E R N R R N Q M K A L F R E L N S L V P H Q S S K E A I S L P D Q L E E A T N Y I
 
AT4G20970.1     K K L Q V N V E K K R E R K R N L V A T T T L E K L N S V G S S S V S S S V D V S V P R K L P K I E I Q E T G S I F H I
gm041497_Glyma1    K K L Q I N L E K M K D K K N M L L G - - - I E R P N - V R M N N G G R T V R L N S P R - - - - I E I Q Q M G S A L E V
 
AT4G20970.1     F L V T S L E H K F M F C E I I R V L T E E L G A E I T H A G Y S I V D D A V F H T L H C K V E E H D Y G A R S Q I P E
gm041497_Glyma1    V L I T G F D C Q F M F S E T I R V L H E E - G V D V V N A S Y K V I E G A V F H S I H C Q L I S - - - - - - - - - - -
 
AT4G20970.1     R L E K I V N S V H - - - - - -
gm041497_Glyma1    - L H H I I N L L H I C F F F F
 
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