fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G21330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041363 not found in 191aa AT4G21330.1 1st_1st 0.320209973 Ib
Pt019422 not found in 266aa AT4G21330.1 1st_1st 0.354330708 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G21330.1     MGGGSRFQEPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTN
gm041363_Glyma1 --------MEQMMSRKRN---YDDDTREYKSKNLETERRRREKLSSRLLMLRSM------
pt019422_POPTR_ ------------MGRKRT---SYDDTVGYKSKNLHAERRRREKLSNRLLTLRALVPIITN
                            *.*::      ::   :** **.:********  **: **:       

AT4G21330.1     MTKASIVEDAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEM
gm041363_Glyma1 MNKATIVEDAITYIEKLQDKVQNLSQELHQMEATSVETA--------ETKIVEIDAVEDM
pt019422_POPTR_ MNKGTIIEDAITYIQELKKNVEALTDMLQEMEASSSEEE-------FKTRVNEIDASEEM
                *.*.:*:******* :*:.:*: * : :::** :. *          :..:   *  *:*

AT4G21330.1     KKLGIEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILI
gm041363_Glyma1 KNWGIQEEVRVAQINENKLWVKIIIEKKRGRFNRLMQALNNFGIELIDTNLTTTKGSFLI
pt019422_POPTR_ KLCGIKEDVQVTNIEGDKLWIKIILEKKRGGFARLMEKMACFGLELIDSNVTTSKGAMLV
                *  **:*:*:: :*   *:*:*** **: * * ::*: :  :*:*:** .:**::*::*:

AT4G21330.1     SASVQTQ-------------------------------------------ELCDVEQTKD
gm041363_Glyma1 TSCIKHYLCGIKSI-----RIDLKMN---------------------TLIQLCKLN----
pt019422_POPTR_ TACVEAKNSTMVPIFTDKKRIKQKENVPIIVSADQGTVDTDHQRHIETLLTKCNINRTTK
                ::.::                                               *.::    

AT4G21330.1     -----------------FLLEVM---------------RSNP------
gm041363_Glyma1 -----------------YVLCLF-------------------------
pt019422_POPTR_ LLNLPLHRLGCGNFSTHHLTCLVTAEISTVHNSIFKLSNQRPVMQMTI
                                 .:  :.
BoxShade v3.31 C (beta, 970507) Output
AT4G21330.1     M G G G S R F Q E P V R M S R R K Q V T K E K E E D E N F K S P N L E A E R R R R E K L H C R L M A L R S H V P I V T N
gm041363_Glyma1    - - - - - - - - M E Q M M S R K R N - - - Y D D D T R E Y K S K N L E T E R R R R E K L S S R L L M L R S M - - - - - -
pt019422_POPTR_    - - - - - - - - - - - - M G R K R T - - - S Y D D T V G Y K S K N L H A E R R R R E K L S N R L L T L R A L V P I I T N
 
AT4G21330.1     M T K A S I V E D A I T Y I G E L Q N N V K N L L E T F H E M E E A P P E I D E E Q T D P M I K P E V E T S D L N E E M
gm041363_Glyma1    M N K A T I V E D A I T Y I E K L Q D K V Q N L S Q E L H Q M E A T S V E T A - - - - - - - - E T K I V E I D A V E D M
pt019422_POPTR_    M N K G T I I E D A I T Y I Q E L K K N V E A L T D M L Q E M E A S S S E E E - - - - - - - F K T R V N E I D A S E E M
 
AT4G21330.1     K K L G I E E N V Q L C K I G E R K F W L K I I T E K R D G I F T K F M E V M R F L G F E I I D I S L T T S N G A I L I
gm041363_Glyma1    K N W G I Q E E V R V A Q I N E N K L W V K I I I E K K R G R F N R L M Q A L N N F G I E L I D T N L T T T K G S F L I
pt019422_POPTR_    K L C G I K E D V Q V T N I E G D K L W I K I I L E K K R G G F A R L M E K M A C F G L E L I D S N V T T S K G A M L V
 
AT4G21330.1     S A S V Q T Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E L C D V E Q T K D
gm041363_Glyma1    T S C I K H Y L C G I K S I - - - - - R I D L K M N - - - - - - - - - - - - - - - - - - - - - T L I Q L C K L N - - - -
pt019422_POPTR_    T A C V E A K N S T M V P I F T D K K R I K Q K E N V P I I V S A D Q G T V D T D H Q R H I E T L L T K C N I N R T T K
 
AT4G21330.1     - - - - - - - - - - - - - - - - - F L L E V M - - - - - - - - - - - - - - - R S N P - - - - - -
gm041363_Glyma1    - - - - - - - - - - - - - - - - - Y V L C L F - - - - - - - - - - - - - - - - - - - - - - - - -
pt019422_POPTR_    L L N L P L H R L G C G N F S T H H L T C L V T A E I S T V H N S I F K L S N Q R P V M Q M T I
 
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