Input
| Putative repression domain
|
|
AT4G21330.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt019422 |
not found in 266aa |
AT4G21330.1 |
1st_1st |
0.354330708 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G21330.1 MGGGSRFQEPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTN
pt019422_POPTR_ ------------MGRKR---TSYDDTVGYKSKNLHAERRRREKLSNRLLTLRALVPIITN
*.*:: .. :: .:** **.********* **::**: ***:**
AT4G21330.1 MTKASIVEDAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEM
pt019422_POPTR_ MNKGTIIEDAITYIQELKKNVEALTDMLQEMEASSSE--EE-----FKTRVNEIDASEEM
*.*.:*:******* **::**: * : ::*** :..* ** :*..*: * .***
AT4G21330.1 KKLGIEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILI
pt019422_POPTR_ KLCGIKEDVQVTNIEGDKLWIKIILEKKRGGFARLMEKMACFGLELIDSNVTTSKGAMLV
* **:*:**: :* *:*:*** **: * *:::** * :*:*:** .:***:**:*:
AT4G21330.1 SASVQTQEL-------------------------------------------CDVEQTKD
pt019422_POPTR_ TACVEAKNSTMVPIFTDKKRIKQKENVPIIVSADQGTVDTDHQRHIETLLTKCNINRTTK
:*.*:::: *::::*..
AT4G21330.1 FL--------------------------------LEVMRSNP------
pt019422_POPTR_ LLNLPLHRLGCGNFSTHHLTCLVTAEISTVHNSIFKLSNQRPVMQMTI
:* ::: ...*
BoxShade v3.31 C (beta, 970507) Output
AT4G21330.1 |
M |
G |
G |
G |
S |
R |
F |
Q |
E |
P |
V |
R |
M |
S |
R |
R |
K |
Q |
V |
T |
K |
E |
K |
E |
E |
D |
E |
N |
F |
K |
S |
P |
N |
L |
E |
A |
E |
R |
R |
R |
R |
E |
K |
L |
H |
C |
R |
L |
M |
A |
L |
R |
S |
H |
V |
P |
I |
V |
T |
N |
pt019422_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
G |
R |
K |
R |
- |
- |
- |
T |
S |
Y |
D |
D |
T |
V |
G |
Y |
K |
S |
K |
N |
L |
H |
A |
E |
R |
R |
R |
R |
E |
K |
L |
S |
N |
R |
L |
L |
T |
L |
R |
A |
L |
V |
P |
I |
I |
T |
N |
|
AT4G21330.1 |
M |
T |
K |
A |
S |
I |
V |
E |
D |
A |
I |
T |
Y |
I |
G |
E |
L |
Q |
N |
N |
V |
K |
N |
L |
L |
E |
T |
F |
H |
E |
M |
E |
E |
A |
P |
P |
E |
I |
D |
E |
E |
Q |
T |
D |
P |
M |
I |
K |
P |
E |
V |
E |
T |
S |
D |
L |
N |
E |
E |
M |
pt019422_POPTR_ |
M |
N |
K |
G |
T |
I |
I |
E |
D |
A |
I |
T |
Y |
I |
Q |
E |
L |
K |
K |
N |
V |
E |
A |
L |
T |
D |
M |
L |
Q |
E |
M |
E |
A |
S |
S |
S |
E |
- |
- |
E |
E |
- |
- |
- |
- |
- |
F |
K |
T |
R |
V |
N |
E |
I |
D |
A |
S |
E |
E |
M |
|
AT4G21330.1 |
K |
K |
L |
G |
I |
E |
E |
N |
V |
Q |
L |
C |
K |
I |
G |
E |
R |
K |
F |
W |
L |
K |
I |
I |
T |
E |
K |
R |
D |
G |
I |
F |
T |
K |
F |
M |
E |
V |
M |
R |
F |
L |
G |
F |
E |
I |
I |
D |
I |
S |
L |
T |
T |
S |
N |
G |
A |
I |
L |
I |
pt019422_POPTR_ |
K |
L |
C |
G |
I |
K |
E |
D |
V |
Q |
V |
T |
N |
I |
E |
G |
D |
K |
L |
W |
I |
K |
I |
I |
L |
E |
K |
K |
R |
G |
G |
F |
A |
R |
L |
M |
E |
K |
M |
A |
C |
F |
G |
L |
E |
L |
I |
D |
S |
N |
V |
T |
T |
S |
K |
G |
A |
M |
L |
V |
|
AT4G21330.1 |
S |
A |
S |
V |
Q |
T |
Q |
E |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
D |
V |
E |
Q |
T |
K |
D |
pt019422_POPTR_ |
T |
A |
C |
V |
E |
A |
K |
N |
S |
T |
M |
V |
P |
I |
F |
T |
D |
K |
K |
R |
I |
K |
Q |
K |
E |
N |
V |
P |
I |
I |
V |
S |
A |
D |
Q |
G |
T |
V |
D |
T |
D |
H |
Q |
R |
H |
I |
E |
T |
L |
L |
T |
K |
C |
N |
I |
N |
R |
T |
T |
K |
|
AT4G21330.1 |
F |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
L |
E |
V |
M |
R |
S |
N |
P |
- |
- |
- |
- |
- |
- |
pt019422_POPTR_ |
L |
L |
N |
L |
P |
L |
H |
R |
L |
G |
C |
G |
N |
F |
S |
T |
H |
H |
L |
T |
C |
L |
V |
T |
A |
E |
I |
S |
T |
V |
H |
N |
S |
I |
F |
K |
L |
S |
N |
Q |
R |
P |
V |
M |
Q |
M |
T |
I |
|
|