fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G21330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041363 not found in 191aa AT4G21330.1 1st_1st 0.320209973 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G21330.1     MGGGSRFQEPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTN
gm041363_Glyma1 -------MEQM-MSRKRNYDDDTRE---YKSKNLETERRRREKLSSRLLMLRSM------
                        * : ***:::  .:..*   :** ***:******** .**: ***       

AT4G21330.1     MTKASIVEDAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEM
gm041363_Glyma1 MNKATIVEDAITYIEKLQDKVQNLSQELHQMEATSVETAETKI-------VEI-DAVEDM
                *.**:********* :**::*:** : :*:** :. *  * :        **  *  *:*

AT4G21330.1     KKLGIEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILI
gm041363_Glyma1 KNWGIQEEVRVAQINENKLWVKIIIEKKRGRFNRLMQALNNFGIELIDTNLTTTKGSFLI
                *: **:*:*::.:*.*.*:*:*** **: * *.::*:.:. :*:*:** .***::*::**

AT4G21330.1     SASVQTQELCDVEQTK-----DFLLEVMRSNP-----
gm041363_Glyma1 TSCIK-HYLCGIKSIRIDLKMNTLIQLCKLNYVLCLF
                ::.:: : **.::. :     : *::: : *
BoxShade v3.31 C (beta, 970507) Output
AT4G21330.1     M G G G S R F Q E P V R M S R R K Q V T K E K E E D E N F K S P N L E A E R R R R E K L H C R L M A L R S H V P I V T N
gm041363_Glyma1    - - - - - - - M E Q M - M S R K R N Y D D D T R E - - - Y K S K N L E T E R R R R E K L S S R L L M L R S M - - - - - -
 
AT4G21330.1     M T K A S I V E D A I T Y I G E L Q N N V K N L L E T F H E M E E A P P E I D E E Q T D P M I K P E V E T S D L N E E M
gm041363_Glyma1    M N K A T I V E D A I T Y I E K L Q D K V Q N L S Q E L H Q M E A T S V E T A E T K I - - - - - - - V E I - D A V E D M
 
AT4G21330.1     K K L G I E E N V Q L C K I G E R K F W L K I I T E K R D G I F T K F M E V M R F L G F E I I D I S L T T S N G A I L I
gm041363_Glyma1    K N W G I Q E E V R V A Q I N E N K L W V K I I I E K K R G R F N R L M Q A L N N F G I E L I D T N L T T T K G S F L I
 
AT4G21330.1     S A S V Q T Q E L C D V E Q T K - - - - - D F L L E V M R S N P - - - - -
gm041363_Glyma1    T S C I K - H Y L C G I K S I R I D L K M N T L I Q L C K L N Y V L C L F
 
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