fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G21440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023923 not found in 508aa AT4G05100.1 1st_not 0.419512195 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G21440.1     MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNY
Sb023923_Sorbi1 MGRAPCCEKSGMKKGPWTPEEDEKLIAYIKKHGQGNWRTLPKNAGLARCGKSCRLRWTNY
                *.*:*****.*:******.***:**: **:*** ************ *************

AT4G21440.1     LRPDIKRGRFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRKKLLRMG
Sb023923_Sorbi1 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG
                ***********************:**********************:*******:*****

AT4G21440.1     IDPVTHSPRLDLLDISSIL--ASSLYNSSSHHMNMSRLMMDTNRRHHQQHPLVN-PEILK
Sb023923_Sorbi1 IDPVTHAPRLDLLDLSALLKPAAAAYYPTQADLDTLRAL----------EPLANYPDLLR
                ******:*******:*::*  *:: * .:. .::  * :          .**.* *::*:

AT4G21440.1     LATSLFS--------QNQNQNLV--VDHDSRTQEKQTVYSQTGV--NQYQTNQYFE----
Sb023923_Sorbi1 LASTLLSSGPPAIGDHHQNGQLLPWILQAQMAQQAAAAMAQQVAPPPQQQAEQFMQAGAA
                **::*:*        ::** :*:  : : . :*:  :. :*  .   * *::*:::    

AT4G21440.1     -------------NTITQELQS-----------SMPPFPNEARQFNNMDHHFNGFGEQNL
Sb023923_Sorbi1 CQMPDLVHMNSNPTTVQQQLAAAHQDMAAAACHSMQPPNNTGYEVDSLD-----------
                             .*: *:* :           ** *  * . :.:.:*           

AT4G21440.1     VSTSTTSVQDCYNPSFNDYSSSNFVLDPSYSDQSFNFANSV---LNTPSSSP------SP
Sb023923_Sorbi1 VPALMQMVQAADASNLQQWSSTV----TSSSNNNNNNNNNVGSGVSTPSSSPVARLNHST
                *.:    ** .  ..::::**:     .* *::. *  *.*   :.******      *.

AT4G21440.1     TTLNSSYINSSSCSTEDEIESYCSNLMKFDIPDFLDVNGFII
Sb023923_Sorbi1 STTTTTYGGASASTSND--AAAAAALFNMQLSELLDVSDYM-
                :* .::* .:*:.:::*   : .: *:::::.::***..::
BoxShade v3.31 C (beta, 970507) Output
AT4G21440.1     M A R S P C C E K N G L K K G P W T S E E D Q K L V D Y I Q K H G Y G N W R T L P K N A G L Q R C G K S C R L R W T N Y
Sb023923_Sorbi1    M G R A P C C E K S G M K K G P W T P E E D E K L I A Y I K K H G Q G N W R T L P K N A G L A R C G K S C R L R W T N Y
 
AT4G21440.1     L R P D I K R G R F S F E E E E T I I Q L H S F L G N K W S A I A A R L P G R T D N E I K N F W N T H I R K K L L R M G
Sb023923_Sorbi1    L R P D I K R G R F S F E E E E T I I Q L H S I L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R M G
 
AT4G21440.1     I D P V T H S P R L D L L D I S S I L - - A S S L Y N S S S H H M N M S R L M M D T N R R H H Q Q H P L V N - P E I L K
Sb023923_Sorbi1    I D P V T H A P R L D L L D L S A L L K P A A A A Y Y P T Q A D L D T L R A L - - - - - - - - - - E P L A N Y P D L L R
 
AT4G21440.1     L A T S L F S - - - - - - - - Q N Q N Q N L V - - V D H D S R T Q E K Q T V Y S Q T G V - - N Q Y Q T N Q Y F E - - - -
Sb023923_Sorbi1    L A S T L L S S G P P A I G D H H Q N G Q L L P W I L Q A Q M A Q Q A A A A M A Q Q V A P P P Q Q Q A E Q F M Q A G A A
 
AT4G21440.1     - - - - - - - - - - - - - N T I T Q E L Q S - - - - - - - - - - - S M P P F P N E A R Q F N N M D H H F N G F G E Q N L
Sb023923_Sorbi1    C Q M P D L V H M N S N P T T V Q Q Q L A A A H Q D M A A A A C H S M Q P P N N T G Y E V D S L D - - - - - - - - - - -
 
AT4G21440.1     V S T S T T S V Q D C Y N P S F N D Y S S S N F V L D P S Y S D Q S F N F A N S V - - - L N T P S S S P - - - - - - S P
Sb023923_Sorbi1    V P A L M Q M V Q A A D A S N L Q Q W S S T V - - - - T S S S N N N N N N N N N V G S G V S T P S S S P V A R L N H S T
 
AT4G21440.1     T T L N S S Y I N S S S C S T E D E I E S Y C S N L M K F D I P D F L D V N G F I I
Sb023923_Sorbi1    S T T T T T Y G G A S A S T S N D - - A A A A A A L F N M Q L S E L L D V S D Y M -
 
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