fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G21440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034220 not found in 313aa AT4G05100.1 not_not 0.417886178 III
Gm037693 not found in 310aa AT4G28110.1 not_not 0.411382113 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G21440.1     MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNY
gm034220_Glyma1 MGRAPCCDKNDLKKGPWTPEEDLLLTNYIQTYGPGNWRTLPKNAGLQRCGKSCRLRWTNY
gm037693_Glyma1 MGRAPCCDKNGLKKGPWTSEEDLLLTNYIQTHGPGNWRTIPKNAGLQRCGKSCRLRWTNY
                *.*:***:**.*******.***  *.:***.:* *****:********************

AT4G21440.1     LRPDIKRGRFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRKKLLRMG
gm034220_Glyma1 LRPDIKRGKFSFEEEEAIIQLHSVLGNKWSAIAAKLPGRTDNEIKNYWNTNIRKRLLRMG
gm037693_Glyma1 LRPDIKRGRFSFEEEEAIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHVRKRLLRTG
                ********:*******:******.**********:***********:***::**:*** *

AT4G21440.1     IDPVTHSPRLDLLDISSILASSLYNSSSHHMNMSRLMMDTNRRHHQQHPLVNPEILKLAT
gm034220_Glyma1 IDPVTHAPRLDLLDMSSILRSAIGTVNPSFLNLQGLL--------GAQALMNPEFFKLAA
gm037693_Glyma1 IDPVTHAPRLDLLDISSILRSAIGNVNPSILNLQGLL--------GAQALMNPEFLKLAA
                ******:*******:**** *:: . ..  :*:. *:          :.*:***::***:

AT4G21440.1     -----SLFSQNQNQNLVVDHDSRTQEKQTVYSQTGV---NQ-YQTNQYFENTITQELQS-
gm034220_Glyma1 TATLLSLKNHENASNLVS--------------QNQVAAPNQ-FQTPTLSNNNVNNGLSSI
gm037693_Glyma1 TATLLSLKNNENPSNLVSQVQQQFNSAGNCLVQNQVAAPNDPFQTPT----HVNNGLSSS
                     ** .::: .***               *. *   *: :**       :.: *.* 

AT4G21440.1     -----SMPPFPNE-------ARQFNNMD--------HHFNGFGEQNLVSTSTTSVQDCYN
gm034220_Glyma1 SPENSSIPSYLGE-NNYQLNAQQINQVDLLLDPELEHYLNSI-NQNIGHESV--------
gm037693_Glyma1 SPEN-SILSHLGENNNYQLNAQQINQVDLLLDHELEHYLNCV-NQNIGYESV--------
                     *: .. .*       *:*:*::*        *::* . :**:   *.        

AT4G21440.1     PSFNDYSSSNFVLDPSYSDQSFNFANSVLNTPSSSPSPTTLNSSYINSSSCSTEDEIESY
gm034220_Glyma1 ------------------------------TPLSTPTSLNSSSTYVNS---CAEEERDTY
gm037693_Glyma1 ------------------------------TPLSTPTPLNSSSTYVNS---STEEERDTY
                                              ** *:*:. . .*:*:**   .:*:* ::*

AT4G21440.1     CSNLMKFDIPDFLDVNGFII
gm034220_Glyma1 CSDVFKLEIPESLDISDFL-
gm037693_Glyma1 CSDIF---------------
                **:::
BoxShade v3.31 C (beta, 970507) Output
AT4G21440.1     M A R S P C C E K N G L K K G P W T S E E D Q K L V D Y I Q K H G Y G N W R T L P K N A G L Q R C G K S C R L R W T N Y
gm034220_Glyma1    M G R A P C C D K N D L K K G P W T P E E D L L L T N Y I Q T Y G P G N W R T L P K N A G L Q R C G K S C R L R W T N Y
gm037693_Glyma1    M G R A P C C D K N G L K K G P W T S E E D L L L T N Y I Q T H G P G N W R T I P K N A G L Q R C G K S C R L R W T N Y
 
AT4G21440.1     L R P D I K R G R F S F E E E E T I I Q L H S F L G N K W S A I A A R L P G R T D N E I K N F W N T H I R K K L L R M G
gm034220_Glyma1    L R P D I K R G K F S F E E E E A I I Q L H S V L G N K W S A I A A K L P G R T D N E I K N Y W N T N I R K R L L R M G
gm037693_Glyma1    L R P D I K R G R F S F E E E E A I I Q L H S V L G N K W S A I A A R L P G R T D N E I K N Y W N T H V R K R L L R T G
 
AT4G21440.1     I D P V T H S P R L D L L D I S S I L A S S L Y N S S S H H M N M S R L M M D T N R R H H Q Q H P L V N P E I L K L A T
gm034220_Glyma1    I D P V T H A P R L D L L D M S S I L R S A I G T V N P S F L N L Q G L L - - - - - - - - G A Q A L M N P E F F K L A A
gm037693_Glyma1    I D P V T H A P R L D L L D I S S I L R S A I G N V N P S I L N L Q G L L - - - - - - - - G A Q A L M N P E F L K L A A
 
AT4G21440.1     - - - - - S L F S Q N Q N Q N L V V D H D S R T Q E K Q T V Y S Q T G V - - - N Q - Y Q T N Q Y F E N T I T Q E L Q S -
gm034220_Glyma1    T A T L L S L K N H E N A S N L V S - - - - - - - - - - - - - - Q N Q V A A P N Q - F Q T P T L S N N N V N N G L S S I
gm037693_Glyma1    T A T L L S L K N N E N P S N L V S Q V Q Q Q F N S A G N C L V Q N Q V A A P N D P F Q T P T - - - - H V N N G L S S S
 
AT4G21440.1     - - - - - S M P P F P N E - - - - - - - A R Q F N N M D - - - - - - - - H H F N G F G E Q N L V S T S T T S V Q D C Y N
gm034220_Glyma1    S P E N S S I P S Y L G E - N N Y Q L N A Q Q I N Q V D L L L D P E L E H Y L N S I - N Q N I G H E S V - - - - - - - -
gm037693_Glyma1    S P E N - S I L S H L G E N N N Y Q L N A Q Q I N Q V D L L L D H E L E H Y L N C V - N Q N I G Y E S V - - - - - - - -
 
AT4G21440.1     P S F N D Y S S S N F V L D P S Y S D Q S F N F A N S V L N T P S S S P S P T T L N S S Y I N S S S C S T E D E I E S Y
gm034220_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T P L S T P T S L N S S S T Y V N S - - - C A E E E R D T Y
gm037693_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T P L S T P T P L N S S S T Y V N S - - - S T E E E R D T Y
 
AT4G21440.1     C S N L M K F D I P D F L D V N G F I I
gm034220_Glyma1    C S D V F K L E I P E S L D I S D F L -
gm037693_Glyma1    C S D I F - - - - - - - - - - - - - - -
 
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