fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G22680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023618 not found in 488aa AT4G22680.1 1st_1st 0.494402985 Ia
Gm011325 not found in 271aa AT4G22680.1 1st_1st 0.554104477 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G22680.1     --MGRQPCCDKLGVKKGPWTVEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWT
Sb023618_Sorbi1 FGMGRQPCCDKLGVKRGPWTAEEDRKLINFILTNGHCCWRAVPKLAGLLRCGKSCRLRWT
gm011325_Glyma0 --MGRQPCCDKLGVKKGPWTAEEDKKLIKFILTNGQCCWRAVPKLAGLRRCGKSCRLRWT
                  *************:****.***:***:******:*****:****** ***********

AT4G22680.1     NYLRPDLKRGLLSHDEEQLVIDLHANLGNKWSKIASRLPGRTDNEIKNHWNTHIKKKLLK
Sb023618_Sorbi1 NYLRPDLKRGLLTDAEEQVVIDLHGKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIK
gm011325_Glyma0 NYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLK
                ************:. ***:*****..***:*****::*********************:*

AT4G22680.1     MGIDPMTHQPLNQE--PSNIDNSKT----------IPSNPDDVSVEPKTTNTKYVEISVT
Sb023618_Sorbi1 MGIDPVTHEPLDRKTSSSPATTSQSAKSDEATKQQSPENDDVVVMRDVPAD------GCS
gm011325_Glyma0 MGIDPVTHEPLNKQAAASSQDSSSSP------AEHLPQPGNNLDDQVKETN------GVL
                *****:**:**:::  .*   .*.:           *.  : :  .   ::      .  

AT4G22680.1     TTEEESSSTVTDQNSSMDNENHLIDNIYDDDELFSYLWSDETTKDEASWSDSNFGVGGTL
Sb023618_Sorbi1 PTESSTNTVSTGGSSSSSSGGH------DQDPLVKWLLEEEPPTGDEPWLNFSGSVDVDE
gm011325_Glyma0 LNSEENSSSSQAENSSGD-DSLLLESICSDDSLLNSMWLDETPLVEALW-DTTPNLENT-
                 ......:     .** .  .       .:* *.. :  :*..  :  * : . .:    

AT4G22680.1     YDHNISGADADFPIWSPERINDEKMFLDYCQDFGVHDF-----GF---------------
Sb023618_Sorbi1 FSSIAAGPE-LLP-WD----GATDWLLD-YQDFGLGDSATLVDGY---------MVNNSS
gm011325_Glyma0 -NNNMS----LLPSWE----ENCAWLLD-CQDFGIHDF-----GFNEIEANALQTVGMKE
                 .   :     :* *.         :**  ****: *      *:               

AT4G22680.1     -----
Sb023618_Sorbi1 NGAKL
gm011325_Glyma0 EGH--
BoxShade v3.31 C (beta, 970507) Output
AT4G22680.1     - - M G R Q P C C D K L G V K K G P W T V E E D K K L I N F I L T N G H C C W R A L P K L A G L R R C G K S C R L R W T
Sb023618_Sorbi1    F G M G R Q P C C D K L G V K R G P W T A E E D R K L I N F I L T N G H C C W R A V P K L A G L L R C G K S C R L R W T
gm011325_Glyma0    - - M G R Q P C C D K L G V K K G P W T A E E D K K L I K F I L T N G Q C C W R A V P K L A G L R R C G K S C R L R W T
 
AT4G22680.1     N Y L R P D L K R G L L S H D E E Q L V I D L H A N L G N K W S K I A S R L P G R T D N E I K N H W N T H I K K K L L K
Sb023618_Sorbi1    N Y L R P D L K R G L L T D A E E Q V V I D L H G K L G N R W S K I A A K L P G R T D N E I K N H W N T H I K K K L I K
gm011325_Glyma0    N Y L R P D L K R G L L T E A E E Q L V I D L H A R L G N R W S K I A A R L P G R T D N E I K N H W N T H I K K K L L K
 
AT4G22680.1     M G I D P M T H Q P L N Q E - - P S N I D N S K T - - - - - - - - - - I P S N P D D V S V E P K T T N T K Y V E I S V T
Sb023618_Sorbi1    M G I D P V T H E P L D R K T S S S P A T T S Q S A K S D E A T K Q Q S P E N D D V V V M R D V P A D - - - - - - G C S
gm011325_Glyma0    M G I D P V T H E P L N K Q A A A S S Q D S S S S P - - - - - - A E H L P Q P G N N L D D Q V K E T N - - - - - - G V L
 
AT4G22680.1     T T E E E S S S T V T D Q N S S M D N E N H L I D N I Y D D D E L F S Y L W S D E T T K D E A S W S D S N F G V G G T L
Sb023618_Sorbi1    P T E S S T N T V S T G G S S S S S S G G H - - - - - - D Q D P L V K W L L E E E P P T G D E P W L N F S G S V D V D E
gm011325_Glyma0    L N S E E N S S S S Q A E N S S G D - D S L L L E S I C S D D S L L N S M W L D E T P L V E A L W - D T T P N L E N T -
 
AT4G22680.1     Y D H N I S G A D A D F P I W S P E R I N D E K M F L D Y C Q D F G V H D F - - - - - G F - - - - - - - - - - - - - - -
Sb023618_Sorbi1    F S S I A A G P E - L L P - W D - - - - G A T D W L L D - Y Q D F G L G D S A T L V D G Y - - - - - - - - - M V N N S S
gm011325_Glyma0    - N N N M S - - - - L L P S W E - - - - E N C A W L L D - C Q D F G I H D F - - - - - G F N E I E A N A L Q T V G M K E
 
AT4G22680.1     - - - - -
Sb023618_Sorbi1    N G A K L
gm011325_Glyma0    E G H - -
 
0