fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G22680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp003312 not found in 354aa AT5G14340.1 1st_not 0.406716417 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G22680.1     MGRQPCCDKLGVKKGPWTVEEDKKLINFILTNGHCCWRALPKLAGLRRCGKSCRLRWTNY
pp003312_Pp1s43 MGRKPCCEKVGLKRGPWAADEDKKLVSYINAHGVSCWRAIPKLAGLLRCGKSCRLRWTNY
                ***:***:*:*:*:***:.:*****:.:* ::* .****:****** *************

AT4G22680.1     LRPDLKRGLLSHDEEQLVIDLHANLGNKWSKIASRLPGRTDNEIKNHWNTHIKKKLLKMG
pp003312_Pp1s43 LRPDLKRGGFTDAEENLILDLHATLGNRWSKIAMQLPGRTDNEIKNYWNTHLKKKLCSMG
                ******** ::. **:*::****.***:***** :***********:****:**** .**

AT4G22680.1     IDPMTHQPLNQ----------EPSNIDNSK-----------TIPSNPDDVSVEPKTTN--
pp003312_Pp1s43 LDPVTHKPVDSACTDGDTETADEGNLDSSEGHSGHSKVMENSLASKVSDELAQLKTIDYL
                :**:**:*::.          : .*:*.*:           ::.*: .*  .: ** :  

AT4G22680.1     -----------TKYVEI-----------SVTTT--------------EEESSSTVTDQNS
pp003312_Pp1s43 GERMDTQKPFPTTCNEIPEQGAISGKSCSLDTTNSFKEHKPDVFVKLEEGTYTTGPDHMN
                           *.  **           *: **              ** : :* .*: .

AT4G22680.1     SMDNENHLIDNIYDDDELFSYLWSDETTKDEA-----------------------SWSDS
pp003312_Pp1s43 AIALENHTPLGPNSEGAADSCWLPQEQSLDTAVGGSSFYQEVAVMNGGGLFRQLSGFTQS
                ::  ***   .  .:.   *   .:* : * *                       .:::*

AT4G22680.1     NFGVGG--TLYDH----------NISGADADF--PIWSPERINDEKM--FLDYCQDFGVH
pp003312_Pp1s43 NMATAGWSTYFGETPGQPSSTGCSISSWNQSFVQPPGVPPSKEIQKLAAILDQI------
                *:...*  * :..          .**. : .*  *   *   : :*:  :**        

AT4G22680.1     DFGF
pp003312_Pp1s43 ----
BoxShade v3.31 C (beta, 970507) Output
AT4G22680.1     M G R Q P C C D K L G V K K G P W T V E E D K K L I N F I L T N G H C C W R A L P K L A G L R R C G K S C R L R W T N Y
pp003312_Pp1s43    M G R K P C C E K V G L K R G P W A A D E D K K L V S Y I N A H G V S C W R A I P K L A G L L R C G K S C R L R W T N Y
 
AT4G22680.1     L R P D L K R G L L S H D E E Q L V I D L H A N L G N K W S K I A S R L P G R T D N E I K N H W N T H I K K K L L K M G
pp003312_Pp1s43    L R P D L K R G G F T D A E E N L I L D L H A T L G N R W S K I A M Q L P G R T D N E I K N Y W N T H L K K K L C S M G
 
AT4G22680.1     I D P M T H Q P L N Q - - - - - - - - - - E P S N I D N S K - - - - - - - - - - - T I P S N P D D V S V E P K T T N - -
pp003312_Pp1s43    L D P V T H K P V D S A C T D G D T E T A D E G N L D S S E G H S G H S K V M E N S L A S K V S D E L A Q L K T I D Y L
 
AT4G22680.1     - - - - - - - - - - - T K Y V E I - - - - - - - - - - - S V T T T - - - - - - - - - - - - - - E E E S S S T V T D Q N S
pp003312_Pp1s43    G E R M D T Q K P F P T T C N E I P E Q G A I S G K S C S L D T T N S F K E H K P D V F V K L E E G T Y T T G P D H M N
 
AT4G22680.1     S M D N E N H L I D N I Y D D D E L F S Y L W S D E T T K D E A - - - - - - - - - - - - - - - - - - - - - - - S W S D S
pp003312_Pp1s43    A I A L E N H T P L G P N S E G A A D S C W L P Q E Q S L D T A V G G S S F Y Q E V A V M N G G G L F R Q L S G F T Q S
 
AT4G22680.1     N F G V G G - - T L Y D H - - - - - - - - - - N I S G A D A D F - - P I W S P E R I N D E K M - - F L D Y C Q D F G V H
pp003312_Pp1s43    N M A T A G W S T Y F G E T P G Q P S S T G C S I S S W N Q S F V Q P P G V P P S K E I Q K L A A I L D Q I - - - - - -
 
AT4G22680.1     D F G F
pp003312_Pp1s43    - - - -
 
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