fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G22680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029651 not found in 264aa AT4G22680.1 not_1st 0.552238805 II
Gm002162 not found in 286aa AT4G22680.1 not_1st 0.550373134 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G22680.1     -----------------MGRQPCCDKLGVKKGPWTVEEDKKLINFILTNGHCCWRALPKL
gm002162_Glyma0 MVDVLVRVTLHWLLASGMGRQPCCDKLGVKKGPWTAEEDKKLINFILSNGQCCWRAVPKL
gm029651_Glyma1 -----------------MGRQPCCDKLGVKKGPWTAEEDKKLINFIFTNGQCCWRAVPKL
                                 ******************.**********::**:*****:***

AT4G22680.1     AGLRRCGKSCRLRWTNYLRPDLKRGLLSHDEEQLVIDLHANLGNKWSKIASRLPGRTDNE
gm002162_Glyma0 AGLRRCGKSCRLRWTNYLRPDLKRGLLTQAEEQLVIDLHARLGNRWSKIAARLPGRTDNE
gm029651_Glyma1 AGLRRCGKSCRLRWTNYLRPDLKRGLLTQAEEQLVIDLHARLGNRWSKIAARLPGRTDNE
                ***************************:: **********.***:*****:*********

AT4G22680.1     IKNHWNTHIKKKLLKMGIDPMTHQPLNQEPSNIDNSKTIPSNPDDVSVEPKTTNTKYVEI
gm002162_Glyma0 IKNHWNTHIKKKLLKMGIDPVTHEPLNKQVSSKDS-----SSPAEHFSQVNNINIHQVEQ
gm029651_Glyma1 IKNHWNTHIKKKLLKMGIDPLTHEPLNKQVSSKDS-----SSSEENLPQAD--NTHQVKE
                ********************:**:***:: *. *.     *.. :   : .  * : *: 

AT4G22680.1     S--VTTTEEESSSTVTDQNSSMDNENHLIDNIYDDDELFSYLWSDETTKDEASW------
gm002162_Glyma0 NDGVLNSEENSTSSPAENSSG--EESLLVDSICSDVSLINSMWLDETPLMDTLWDNTPKV
gm029651_Glyma1 SDRVLNSEENSSSSAAENSSG--EESLLVE---SDVSLMNTMWLDETPLMDTLWDNTPKL
                .  * .:**:*:*: :::.*.  :*. *::   .* .*:. :* ***.  :: *      

AT4G22680.1     --SDSNFGVGGTLYDHNISGADADFPIWSPERINDEKMFLDYCQDFGVHDFGF-------
gm002162_Glyma0 ENANNNMGL----------------PIGE-----DNCAWLLDCQDFGIHDFGFNCFSEVE
gm029651_Glyma1 ENANSNMGL----------------PIWE-----DNCAWLLDCQDFGIHDFGFNCFSEIE
                  ::.*:*:                ** .     *:  :*  *****:*****       

AT4G22680.1     --------------
gm002162_Glyma0 TNVLQAIGMDRKGL
gm029651_Glyma1 SNVLQSIGMDRKGL
BoxShade v3.31 C (beta, 970507) Output
AT4G22680.1     - - - - - - - - - - - - - - - - - M G R Q P C C D K L G V K K G P W T V E E D K K L I N F I L T N G H C C W R A L P K L
gm002162_Glyma0    M V D V L V R V T L H W L L A S G M G R Q P C C D K L G V K K G P W T A E E D K K L I N F I L S N G Q C C W R A V P K L
gm029651_Glyma1    - - - - - - - - - - - - - - - - - M G R Q P C C D K L G V K K G P W T A E E D K K L I N F I F T N G Q C C W R A V P K L
 
AT4G22680.1     A G L R R C G K S C R L R W T N Y L R P D L K R G L L S H D E E Q L V I D L H A N L G N K W S K I A S R L P G R T D N E
gm002162_Glyma0    A G L R R C G K S C R L R W T N Y L R P D L K R G L L T Q A E E Q L V I D L H A R L G N R W S K I A A R L P G R T D N E
gm029651_Glyma1    A G L R R C G K S C R L R W T N Y L R P D L K R G L L T Q A E E Q L V I D L H A R L G N R W S K I A A R L P G R T D N E
 
AT4G22680.1     I K N H W N T H I K K K L L K M G I D P M T H Q P L N Q E P S N I D N S K T I P S N P D D V S V E P K T T N T K Y V E I
gm002162_Glyma0    I K N H W N T H I K K K L L K M G I D P V T H E P L N K Q V S S K D S - - - - - S S P A E H F S Q V N N I N I H Q V E Q
gm029651_Glyma1    I K N H W N T H I K K K L L K M G I D P L T H E P L N K Q V S S K D S - - - - - S S S E E N L P Q A D - - N T H Q V K E
 
AT4G22680.1     S - - V T T T E E E S S S T V T D Q N S S M D N E N H L I D N I Y D D D E L F S Y L W S D E T T K D E A S W - - - - - -
gm002162_Glyma0    N D G V L N S E E N S T S S P A E N S S G - - E E S L L V D S I C S D V S L I N S M W L D E T P L M D T L W D N T P K V
gm029651_Glyma1    S D R V L N S E E N S S S S A A E N S S G - - E E S L L V E - - - S D V S L M N T M W L D E T P L M D T L W D N T P K L
 
AT4G22680.1     - - S D S N F G V G G T L Y D H N I S G A D A D F P I W S P E R I N D E K M F L D Y C Q D F G V H D F G F - - - - - - -
gm002162_Glyma0    E N A N N N M G L - - - - - - - - - - - - - - - - P I G E - - - - - D N C A W L L D C Q D F G I H D F G F N C F S E V E
gm029651_Glyma1    E N A N S N M G L - - - - - - - - - - - - - - - - P I W E - - - - - D N C A W L L D C Q D F G I H D F G F N C F S E I E
 
AT4G22680.1     - - - - - - - - - - - - - -
gm002162_Glyma0    T N V L Q A I G M D R K G L
gm029651_Glyma1    S N V L Q S I G M D R K G L
 
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