fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G22770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011216 not found in 332aa AT4G12080.1 1st_not 0.473786407 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G22770.1     METTGEVVKTTTGSDG-GVTVVRSNAPSDFHMAPRSETS-NTPPNSVAPPPP--PPPQNS
pt011216_POPTR_ METT--VSSKSSNSGGAGVTVVASDAPSNYQIAPRSDSNPNSTPGSAPPAPPQAPPPHPS
                ****  * ..::.*.* ***** *:***::::****::. *:.*.*..*.**  ***: *

AT4G22770.1     FTPSAAMDGFSSGPIKKRRGRPRKYGHDGA-AVTLSPNPISSAAPTTS-HVIDFSTTSEK
pt011216_POPTR_ --PAAA-----TMPLKKKRGRPRKYGPDGSVTMALSPKPISSAAPAPSPPVIDFSVVKQK
                  *:**     : *:**:******** **: :::***:*******:.*  *****...:*

AT4G22770.1     RGKMKPATPT--PSSFIRPKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQ
pt011216_POPTR_ --KIKPVSKAKISVSWLLMLWQFDLLGEWVACSVGANFTPHIITVNAGEDVTMKIISFSQ
                  *:**.: :  . *::   :*.: **** ..*..***************** :******

AT4G22770.1     QGSLAICVLCANGVVSSVTLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGM
pt011216_POPTR_ QGPRAICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTETGGTRSRSGGM
                **. *****.****:****************************:***:::.*****:***

AT4G22770.1     SVSLASPDGRVVGGGVAGLLVAATPIQ-VVVGTFLGGTNQQEQTPKPHNHNFMSSPLMPT
pt011216_POPTR_ SVSLASPDGRVVGGGVAGLLVAASPVQVVVVGSFLAG-NQHEQKPKKQKHDSLSG-VMPT
                ***********************:*:* ****:**.* **:**.** ::*: :*. :***

AT4G22770.1     SS---NVADHRTIRPMTSSLPISTWTPSFPSDSRHKHSHDFNITLT--
pt011216_POPTR_ AAIPISIADPKS-NFSSPSFRGDSWSP-LPPESRNKPA-DINLTLPAG
                ::   .:** :: .  :.*:  .:*:* :*.:**:* : *:*:**.
BoxShade v3.31 C (beta, 970507) Output
AT4G22770.1     M E T T G E V V K T T T G S D G - G V T V V R S N A P S D F H M A P R S E T S - N T P P N S V A P P P P - - P P P Q N S
pt011216_POPTR_    M E T T - - V S S K S S N S G G A G V T V V A S D A P S N Y Q I A P R S D S N P N S T P G S A P P A P P Q A P P P H P S
 
AT4G22770.1     F T P S A A M D G F S S G P I K K R R G R P R K Y G H D G A - A V T L S P N P I S S A A P T T S - H V I D F S T T S E K
pt011216_POPTR_    - - P A A A - - - - - T M P L K K K R G R P R K Y G P D G S V T M A L S P K P I S S A A P A P S P P V I D F S V V K Q K
 
AT4G22770.1     R G K M K P A T P T - - P S S F I R P K Y Q V E N L G E W S P S S A A A N F T P H I I T V N A G E D V T K R I I S F S Q
pt011216_POPTR_    - - K I K P V S K A K I S V S W L L M L W Q F D L L G E W V A C S V G A N F T P H I I T V N A G E D V T M K I I S F S Q
 
AT4G22770.1     Q G S L A I C V L C A N G V V S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G T F M P S D S D G T R S R T G G M
pt011216_POPTR_    Q G P R A I C V L S A N G V I S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M P T E T G G T R S R S G G M
 
AT4G22770.1     S V S L A S P D G R V V G G G V A G L L V A A T P I Q - V V V G T F L G G T N Q Q E Q T P K P H N H N F M S S P L M P T
pt011216_POPTR_    S V S L A S P D G R V V G G G V A G L L V A A S P V Q V V V V G S F L A G - N Q H E Q K P K K Q K H D S L S G - V M P T
 
AT4G22770.1     S S - - - N V A D H R T I R P M T S S L P I S T W T P S F P S D S R H K H S H D F N I T L T - -
pt011216_POPTR_    A A I P I S I A D P K S - N F S S P S F R G D S W S P - L P P E S R N K P A - D I N L T L P A G
 
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