fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G22770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039991 not found in 325aa AT4G12080.1 not_not 0.444660194 III
Pt016418 not found in 324aa AT4G12080.1 not_not 0.440776699 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G22770.1     METTGEVVKTTTGSDGGVTVVRSNAPSDFHMAPRSETSNTPPNSVAPPPPP---PPQNSF
pt016418_POPTR_ -------MEGREGLSSGVTVIGAEAPSTYHMAPRTEN----PGQIVVSPPAVEVPPVGA-
pt039991_POPTR_ -------MEGREGLSAGVTVIGAEAPSNYHVAPRTEN----PGQFVVSPPAVEVPPVGA-
                       ::   * ..****: ::*** :*:***:*.    *.... .**.   ** .: 

AT4G22770.1     TPSAAMDGFSSGPI-KKRRGRPRKYGHDGA-AVTLSPNPISSAAPTTSHVIDFSTTSEKR
pt016418_POPTR_ -------GLIGGTAEKKKRGRPRKYGPDGAVARALSPMPISASAPHTGG--DYSAG----
pt039991_POPTR_ -------GLTGGTTEKKKRGRPRKYGPDGAVARALSPMPISASAPSPGG--DYSAG----
                       *: .*.  **:******** *** * :*** ***::** ..   *:*:     

AT4G22770.1     GKMKPATPTPSSFIRPKYQ---VENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQ
pt016418_POPTR_ ---KPGKVWPGSYEKKKYKKMGMENLGEWAANSVGTNFTPHVITVNAGEDVTMKVISFSQ
pt039991_POPTR_ ---KPGKVWPGSYEKKKYKKLGMENLGEWAANSVGTNFTPHVITVNAGEDVTMKVISFSQ
                   **..  *.*: : **:   :******:..*..:*****:********** ::*****

AT4G22770.1     QGSLAICVLCANGVVSSVTLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGM
pt016418_POPTR_ QGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTEIQGTRSRSGGM
pt039991_POPTR_ QGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTESQGTRSRSGGM
                **. ***:*.****:*.**************************:***:: :*****:***

AT4G22770.1     SVSLASPDGRVVGGGVAGLLVAATPIQVVVGTFLGGTNQQEQTPKPHN-----HNFMSSP
pt016418_POPTR_ SVSLASPDGRVVGGSVAGLLVAASPVQVVVGSFLPG-NHQEQKPKKPKIDSIPATFAPAP
pt039991_POPTR_ SVSLASPDGRVVGGSVAGLLVAASPVQVVVGSFLAG-NHQDQKPKKPKIDSIPATFAPAP
                **************.********:*:*****:** * *:*:*.**  :      .* .:*

AT4G22770.1     LMPTSSNVADHRTIRPMT-----SSLPISTWTPSFPSDSRHKHSHDFNITLT--
pt016418_POPTR_ AIPASIAEREESAGTPQG-QQNSSPFQRENWATMHSMQDVRNSGTDINISLPEG
pt039991_POPTR_ VIPVSIAEREESVGTPHGQQQNSSSFQRENWATMHSMQDVRNSVTDINISLPEG
                 :*.*    :. .  *       *.:  ..*:. .. :. ::   *:**:*.
BoxShade v3.31 C (beta, 970507) Output
AT4G22770.1     M E T T G E V V K T T T G S D G G V T V V R S N A P S D F H M A P R S E T S N T P P N S V A P P P P P - - - P P Q N S F
pt016418_POPTR_    - - - - - - - M E G R E G L S S G V T V I G A E A P S T Y H M A P R T E N - - - - P G Q I V V S P P A V E V P P V G A -
pt039991_POPTR_    - - - - - - - M E G R E G L S A G V T V I G A E A P S N Y H V A P R T E N - - - - P G Q F V V S P P A V E V P P V G A -
 
AT4G22770.1     T P S A A M D G F S S G P I - K K R R G R P R K Y G H D G A - A V T L S P N P I S S A A P T T S H V I D F S T T S E K R
pt016418_POPTR_    - - - - - - - G L I G G T A E K K K R G R P R K Y G P D G A V A R A L S P M P I S A S A P H T G G - - D Y S A G - - - -
pt039991_POPTR_    - - - - - - - G L T G G T T E K K K R G R P R K Y G P D G A V A R A L S P M P I S A S A P S P G G - - D Y S A G - - - -
 
AT4G22770.1     G K M K P A T P T P S S F I R P K Y Q - - - V E N L G E W S P S S A A A N F T P H I I T V N A G E D V T K R I I S F S Q
pt016418_POPTR_    - - - K P G K V W P G S Y E K K K Y K K M G M E N L G E W A A N S V G T N F T P H V I T V N A G E D V T M K V I S F S Q
pt039991_POPTR_    - - - K P G K V W P G S Y E K K K Y K K L G M E N L G E W A A N S V G T N F T P H V I T V N A G E D V T M K V I S F S Q
 
AT4G22770.1     Q G S L A I C V L C A N G V V S S V T L R Q P D S S G G T L T Y E G R F E I L S L S G T F M P S D S D G T R S R T G G M
pt016418_POPTR_    Q G P R A I C I L S A N G V I S N V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M P T E I Q G T R S R S G G M
pt039991_POPTR_    Q G P R A I C I L S A N G V I S N V T L R Q P D S S G G T L T Y E G R F E I L S L S G S F M P T E S Q G T R S R S G G M
 
AT4G22770.1     S V S L A S P D G R V V G G G V A G L L V A A T P I Q V V V G T F L G G T N Q Q E Q T P K P H N - - - - - H N F M S S P
pt016418_POPTR_    S V S L A S P D G R V V G G S V A G L L V A A S P V Q V V V G S F L P G - N H Q E Q K P K K P K I D S I P A T F A P A P
pt039991_POPTR_    S V S L A S P D G R V V G G S V A G L L V A A S P V Q V V V G S F L A G - N H Q D Q K P K K P K I D S I P A T F A P A P
 
AT4G22770.1     L M P T S S N V A D H R T I R P M T - - - - - S S L P I S T W T P S F P S D S R H K H S H D F N I T L T - -
pt016418_POPTR_    A I P A S I A E R E E S A G T P Q G - Q Q N S S P F Q R E N W A T M H S M Q D V R N S G T D I N I S L P E G
pt039991_POPTR_    V I P V S I A E R E E S V G T P H G Q Q Q N S S S F Q R E N W A T M H S M Q D V R N S V T D I N I S L P E G
 
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