fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G22810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028640 not found in 302aa AT4G22810.1 not_1st 0.594871794 II
Pt039340 not found in 298aa AT4G22810.1 not_1st 0.561538461 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G22810.1     MDPVQSHGSQSSLPPPFHARDFQLHLQQQQQEFFLHHHQQQRNQTDGDQQGGSGG--NRQ
pt039340_POPTR_ MDPVAAHG--RPLPPPFHTRDFHL-------HQF--QHQQQQNSE--DEQSGNGN-LNRG
pt028640_POPTR_ MDPVTAHG--HSLPPPFHTRDFQLHHQQQQQHQF--HHQQQQNSE--DEQSGSSSGLNKS
                **** :**   .******:***:*       . *  :****:*.   *:*.*...  *: 

AT4G22810.1     IKMDREETSDNIDNIANNSGSEGKDIDIHGGSGEGGGGSGGDHQMTRRPRGRPAGSKNKP
pt039340_POPTR_ QKREHAEIATN-----NNNTAEGKELVPSSAGGEG--------EITRRPRGRPAGSKNKP
pt028640_POPTR_ LKRERDE-SNN-----SMGNREGQELI-TSGDGDG--------EITRRPRGRPAGSKNKP
                 * :: * : *     . .  **:::   ...*:*        ::***************

AT4G22810.1     KPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPG
pt039340_POPTR_ KPPIIITRDSPNALRSHVMEIATGCDIMESVSTFARRRQRGVCILSATGTVTNVTLKQPA
pt028640_POPTR_ KPPIIITRDSANALRTHLMEVADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPA
                **********.****:*:**:. ***::***:***********::*.**.*****::**.

AT4G22810.1     SHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAGGQGQVVGGSVVGPLLCAG
pt039340_POPTR_ ---SPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASG
pt028640_POPTR_ ---SPGAIVTLHGRFEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGTLTASG
                   ***::*:**********:**********:*:**::****************.* .:*

AT4G22810.1     PVVVMAASFSNAAYERLPLEEDEMQTPVHGGGGGGSLESPP--MMGQQLQ--HQQQAMSG
pt039340_POPTR_ PVVIMAASFGNAAYERLPLEEDESQTPVPGTG---PLGSPGVSSIGQQNQ--QQHQLMQD
pt028640_POPTR_ PVVIMAASFSNAAYERLPLEEEDPQMPMQGGG----MGSPG--GVGQQQQQPQQHQVMAE
                ***:*****.***********:: * *: * *    : **    :*** *  :*:* *  

AT4G22810.1     H-----QGLPPNLLGSVQLQQQHDQSYWST-GRPPY
pt039340_POPTR_ PNTSLFQGLPQNLLNSVQLPS---EAYWGTGGRPPY
pt028640_POPTR_ QNAQLFHGLPPNLLNSIQLPA---EAYWAT-GRPPY
                      :*** ***.*:**     ::**.* *****
BoxShade v3.31 C (beta, 970507) Output
AT4G22810.1     M D P V Q S H G S Q S S L P P P F H A R D F Q L H L Q Q Q Q Q E F F L H H H Q Q Q R N Q T D G D Q Q G G S G G - - N R Q
pt039340_POPTR_    M D P V A A H G - - R P L P P P F H T R D F H L - - - - - - - H Q F - - Q H Q Q Q Q N S E - - D E Q S G N G N - L N R G
pt028640_POPTR_    M D P V T A H G - - H S L P P P F H T R D F Q L H H Q Q Q Q Q H Q F - - H H Q Q Q Q N S E - - D E Q S G S S S G L N K S
 
AT4G22810.1     I K M D R E E T S D N I D N I A N N S G S E G K D I D I H G G S G E G G G G S G G D H Q M T R R P R G R P A G S K N K P
pt039340_POPTR_    Q K R E H A E I A T N - - - - - N N N T A E G K E L V P S S A G G E G - - - - - - - - E I T R R P R G R P A G S K N K P
pt028640_POPTR_    L K R E R D E - S N N - - - - - S M G N R E G Q E L I - T S G D G D G - - - - - - - - E I T R R P R G R P A G S K N K P
 
AT4G22810.1     K P P I I I T R D S A N A L R T H V M E I G D G C D L V E S V A T F A R R R Q R G V C V M S G T G N V T N V T I R Q P G
pt039340_POPTR_    K P P I I I T R D S P N A L R S H V M E I A T G C D I M E S V S T F A R R R Q R G V C I L S A T G T V T N V T L K Q P A
pt028640_POPTR_    K P P I I I T R D S A N A L R T H L M E V A D G C D I V E S V A T F A R R R Q R G V C I M S G T G T V T N V T L R Q P A
 
AT4G22810.1     S H P S P G S V V S L H G R F E I L S L S G S F L P P P A P P T A T G L S V Y L A G G Q G Q V V G G S V V G P L L C A G
pt039340_POPTR_    - - - S P G A V V T L H G R F E I L S L S G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V G G S V V G P L L A S G
pt028640_POPTR_    - - - S P G A I V T L H G R F E I L S L A G S F L P P P A P P A A T G L T I Y L A G G Q G Q V V G G S V V G T L T A S G
 
AT4G22810.1     P V V V M A A S F S N A A Y E R L P L E E D E M Q T P V H G G G G G G S L E S P P - - M M G Q Q L Q - - H Q Q Q A M S G
pt039340_POPTR_    P V V I M A A S F G N A A Y E R L P L E E D E S Q T P V P G T G - - - P L G S P G V S S I G Q Q N Q - - Q Q H Q L M Q D
pt028640_POPTR_    P V V I M A A S F S N A A Y E R L P L E E E D P Q M P M Q G G G - - - - M G S P G - - G V G Q Q Q Q Q P Q Q H Q V M A E
 
AT4G22810.1     H - - - - - Q G L P P N L L G S V Q L Q Q Q H D Q S Y W S T - G R P P Y
pt039340_POPTR_    P N T S L F Q G L P Q N L L N S V Q L P S - - - E A Y W G T G G R P P Y
pt028640_POPTR_    Q N A Q L F H G L P P N L L N S I Q L P A - - - E A Y W A T - G R P P Y
 
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