fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G22810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002179 not found in 300aa AT4G22810.1 not_1st 0.530769230 II
Gm047008 not found in 287aa AT4G22810.1 not_1st 0.523076923 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G22810.1     MDPVQSHGSQSSLPPPFHA-RDFQLHLQQQQQEFFLHHHQQQRNQTDGDQQGGSGG--NR
gm047008_Glyma1 MDPISAHG--HSLPPPFHT-RDLHLHHQQQQQQ----HQFQSLNQATEDENSGSSG----
gm002179_Glyma0 MDPITAHG--HSLPPPFHAGRDLHLH----QQQ----HQFHSLQ---EDEQSGSSGGLNL
                ***: :**   *******: **::**    **:    *: :. :    *::.**.*    

AT4G22810.1     QIKMDREETSDNIDNIANNSGSEGKDIDIHGGSGEGGGGSGGDHQMTRRPRGRPAGSKNK
gm047008_Glyma1 AQKREREENS-------NGNNE-----------------GAGEAEITRRPRGRPAGSKNK
gm002179_Glyma0 AHKREHEENN-------NNNSSDGK---------EGGGAGSGETEISRRPRGRPAGSKNK
                  * ::**..       *....                 ..*: :::*************

AT4G22810.1     PKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQP
gm047008_Glyma1 PKPPIIITRDSANAMRTHMMEVADGYDIVESVSEFARKRQRGICIMSGTGTVTNVTLRQP
gm002179_Glyma0 PKPPIIITRDSANALKTHVMEVADGCDIVDSVSAFARRRQRGVCIMSGTGTVTNVTLRQP
                **************::**:**:.** *:*:**: ***:****:*:*****.*****:***

AT4G22810.1     GSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAGGQGQVVGGSVVGPLLCA
gm047008_Glyma1 A---SSGSVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLVAS
gm002179_Glyma0 A---SSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGALIAS
                .   *.*:**:**********:**********:*:**::****************.*:.:

AT4G22810.1     GPVVVMAASFSNAAYERLPLEEDEMQTPVHGGGGGGSLESP-------PMMGQQLQHQQQ
gm047008_Glyma1 GPVVIMAASFSNAAYERLPLEDED---PNSLQMQGGSIGSP-----GASGVGQ-----SQ
gm002179_Glyma0 GPVVIMSASFSNAAYERLPLEDED---PSMALQGGGSIGSPGGGGGGGGGVGQQ--QPSQ
                ****:*:**************:::   *      ***: **         :**     .*

AT4G22810.1     AMSGH------QGLPPNLLGSVQLQQQHDQSYW-STGRPPY
gm047008_Glyma1 LLGGDATAPLFHGLPPNLLNSVQMPS---EPFWAASTRPPF
gm002179_Glyma0 QLMGDSTAPLFHGLNPNLLNSVQMPS---ETFW-ATGRSPY
                 : *.      :** ****.***: .   :.:* :: *.*:
BoxShade v3.31 C (beta, 970507) Output
AT4G22810.1     M D P V Q S H G S Q S S L P P P F H A - R D F Q L H L Q Q Q Q Q E F F L H H H Q Q Q R N Q T D G D Q Q G G S G G - - N R
gm047008_Glyma1    M D P I S A H G - - H S L P P P F H T - R D L H L H H Q Q Q Q Q Q - - - - H Q F Q S L N Q A T E D E N S G S S G - - - -
gm002179_Glyma0    M D P I T A H G - - H S L P P P F H A G R D L H L H - - - - Q Q Q - - - - H Q F H S L Q - - - E D E Q S G S S G G L N L
 
AT4G22810.1     Q I K M D R E E T S D N I D N I A N N S G S E G K D I D I H G G S G E G G G G S G G D H Q M T R R P R G R P A G S K N K
gm047008_Glyma1    A Q K R E R E E N S - - - - - - - N G N N E - - - - - - - - - - - - - - - - - G A G E A E I T R R P R G R P A G S K N K
gm002179_Glyma0    A H K R E H E E N N - - - - - - - N N N S S D G K - - - - - - - - - E G G G A G S G E T E I S R R P R G R P A G S K N K
 
AT4G22810.1     P K P P I I I T R D S A N A L R T H V M E I G D G C D L V E S V A T F A R R R Q R G V C V M S G T G N V T N V T I R Q P
gm047008_Glyma1    P K P P I I I T R D S A N A M R T H M M E V A D G Y D I V E S V S E F A R K R Q R G I C I M S G T G T V T N V T L R Q P
gm002179_Glyma0    P K P P I I I T R D S A N A L K T H V M E V A D G C D I V D S V S A F A R R R Q R G V C I M S G T G T V T N V T L R Q P
 
AT4G22810.1     G S H P S P G S V V S L H G R F E I L S L S G S F L P P P A P P T A T G L S V Y L A G G Q G Q V V G G S V V G P L L C A
gm047008_Glyma1    A - - - S S G S V V T L H G R F E I L S L S G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V G G S V V G T L V A S
gm002179_Glyma0    A - - - S S G A V V T L H G R F E I L S L A G S F L P P P A P P A A S G L T I Y L A G G Q G Q V V G G S V V G A L I A S
 
AT4G22810.1     G P V V V M A A S F S N A A Y E R L P L E E D E M Q T P V H G G G G G G S L E S P - - - - - - - P M M G Q Q L Q H Q Q Q
gm047008_Glyma1    G P V V I M A A S F S N A A Y E R L P L E D E D - - - P N S L Q M Q G G S I G S P - - - - - G A S G V G Q - - - - - S Q
gm002179_Glyma0    G P V V I M S A S F S N A A Y E R L P L E D E D - - - P S M A L Q G G G S I G S P G G G G G G G G G V G Q Q - - Q P S Q
 
AT4G22810.1     A M S G H - - - - - - Q G L P P N L L G S V Q L Q Q Q H D Q S Y W - S T G R P P Y
gm047008_Glyma1    L L G G D A T A P L F H G L P P N L L N S V Q M P S - - - E P F W A A S T R P P F
gm002179_Glyma0    Q L M G D S T A P L F H G L N P N L L N S V Q M P S - - - E T F W - A T G R S P Y
 
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